Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2605 ATGGGCGATTTCCAAGGCCCCTTCATAGTGTCATCACCCCCTCCTTCACCGTCTTCCTCGGAGAAGTCGAGCACAACGATGTTATACTATGGGCTTGTAGTGGTGGGGGTTGCAGCGGCGGCATTAGCCCTGTACAACTTGATGATGATGAGGAGGAGCAGAAGGAGGCAGATGCAATCAGAAGGCGAAGATGGGTTGGTGGAGGTGGTGAGTGAAAGTAGAATAGAGAACTTGGTTTCATCATCATCATCAAGCTTCAAGTACAAAAAAGAAGGAGTTGTGGGTTATGATGATGAATGTTCAGTTTGCTTATCTGGTTTTGAAGAAGGAGAAGAAGTTCGGAAGCTTCCACAGTGCAAGCACTGGTTCCACGCTCCATGCATAGACATGTGGCTCTACTCTCACTTGGACTGCCCAATTTGTCGAACACCTGTGGTTGGTTTCTCGCAGACATTGCTGGAATCAGGTAATTATGAGAGAGATGAGCAATTACGAATGGAATGA 504 0.4722 MGDFQGPFIVSSPPPSPSSSEKSSTTMLYYGLVVVGVAAAALALYNLMMMRRSRRRQMQSEGEDGLVEVVSESRIENLVSSSSSSFKYKKEGVVGYDDECSVCLSGFEEGEEVRKLPQCKHWFHAPCIDMWLYSHLDCPICRTPVVGFSQTLLESGNYERDEQLRME* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2605 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 150 IPR044675 -
Vra7g2605 167 SMART ring_2 100 141 IPR001841 -
Vra7g2605 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 148 IPR013083 -
Vra7g2605 167 MobiDBLite consensus disorder prediction 1 22 - -
Vra7g2605 167 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Vra7g2605 167 SUPERFAMILY RING/U-box 93 146 - -
Vra7g2605 167 Pfam Ring finger domain 98 142 IPR001841 -
Vra7g2605 167 PANTHER RING-H2 FINGER PROTEIN ATL52-LIKE 12 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2605 Vra-Chr7 46318243 46319718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2605 32 150 C3H Transcription Factor Family AT5G17600 37.500 3.03e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2605 - - vun:114177506 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2605 7 46318243 46319718 Vra7g2605 7 46318243 46319718 ECH
Vra7g2605 7 46318243 46319718 Vra5g0276 5 2569930 2570990 PCT