Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2602 ATGCTTACGTGCATAGCTCGTCCGAAGAAACCTGACGAGTCAGATCCAAACAACGCGACAAGCGCTGCTAAATCGCAAGCCATCAAATCCCTTACTACTCAGATAAGGGATATGGCGTTGAAGGCTTCGGGTGCATACAAGCATTGCGCTCCGTGCACAGGGCCAGCGGCGCAGGGACGAGTGCGGGGCAACACCGAGTCGGACGCGGACTCCGACCGGTTCCGGTGGTCGTACCGGCGGACAGGGAGTTCAAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTAAAGGGGATATCGAGCGGGGAGGGGACGCCAAACTCCGCTAGCGGACGGCGAGCGGAGCCGTTGGTGCTGTTCGTGGAAGAGAACGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACCTTCGTGTCGTTGCCACGTGGCGGTAACGATCTCAAACGCATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCACAAAGGTGGTGGGCAGACAACTACGACAAAGTTATGGAACTTTACAATGTTCAAAGGTTTAGCCGCCAGGCATTCCCTCTTCCGACGCCACCAAGATCTGAAGATGAGAGCACAAAGCTTGAATCAGCAGAAGCCAGTCCTGTAACACCTCCACTGACCAGGGAACGGTTACCTCGTACTATTTACCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTTCTACGACTCAAATGGTTTGAACTCTACCCCAAAAGTCTCCACTATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCGATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCTGGTGATTTATCAATCAGCAATGCCAGTGAGTTGGAGACTGAGTGGGTTGAACAGGATGAACCTGGGGTTTACATTACAATCAGAGCATTGTCAGGCGGCGCAAGGGAGCTCAAACGAGTGAGGTTTAGCCGAGAAAAATTTGGAGAGATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1098 0.5273 MLTCIARPKKPDESDPNNATSAAKSQAIKSLTTQIRDMALKASGAYKHCAPCTGPAAQGRVRGNTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPLVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWADNYDKVMELYNVQRFSRQAFPLPTPPRSEDESTKLESAEASPVTPPLTRERLPRTIYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGLNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASELETEWVEQDEPGVYITIRALSGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2602 365 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Vra7g2602 365 Pfam Transcription factor regulating root and shoot growth via Pin3 309 364 IPR013591 -
Vra7g2602 365 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
Vra7g2602 365 ProSiteProfiles BRX domain profile. 310 365 IPR013591 -
Vra7g2602 365 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 365 IPR044532 -
Vra7g2602 365 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 365 - -
Vra7g2602 365 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
Vra7g2602 365 MobiDBLite consensus disorder prediction 51 70 - -
Vra7g2602 365 MobiDBLite consensus disorder prediction 1 26 - -
Vra7g2602 365 MobiDBLite consensus disorder prediction 196 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2602 Vra-Chr7 46281977 46287640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2602 1 365 Major Intrinsic Protein MIP AT1G31880 44.330 5.36e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2602 - - gmx:100794109 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2602 7 46281977 46287640 Vra7g2602 7 46281977 46287640 ECH
Vra7g2602 7 46281977 46287640 Vra5g0278 5 2588608 2593320 PCT