Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g2594 | ATGGTTTGGTTTCAATGCGAAGATTGTGGAGACAACCTCAAAAAACCCAAGTTGTCGAGTCACTTTCGTACTTGCTCCGCTTACAAATTGTCGTGCATTGACTGTGGGGAAATATTTGGGCGTGACACCGTTCAGGATCACACACAGTGCATTACAGAAGCTGAAAAGTATGGTCCAAAAGGCCAAGGCAAAACTTTGAGTGCTGCAACTGCCACGCCTAACAAGGATAGCAAACAGAGGCCTGAAGTTGATATTAATGTGGGTTTATCTGAGCGGCCTCCTTGGTTCTGTAGTCTTTGCAATACATCAACTACAAGTAAGCAAACACTTCTTCTCCATGCTGACGGGAAGAAGCACAGGGCAAAGGCGAGAGCATTCCACGCTTCAAAGCAGCAACCGATCCAGGCAGATAAATCTGCTACCGATGATGCTAAGACTGTTGTGGAGAGTGGTCCTAATGACAAGGTGAGAGAGGACAGTAATGTGGAGGTCCCAAAATTGAAGGAGTCCTCTACACAAAATGACTCAAAACAAGGGAATGAAACTTCTTCAGCAAAGAAAAAGAGGAAACTTGAAGCATCGAGGGATGGGAAATCTGTTGACCTTGTTAAGAAAAGCAGGAAAGGCACTTCGGTTGACATGGGAAACGGAGAAGTAATTCAGGGTGAAAAAGCAACAGGAGAGAGCAATTTGAAGAAAGAAGGAATGTTAGAACCTTGCTGTACAATTACTGTCAATAAAATAAAATTGAAGAAATTTATCAAATCAGCCTTGAAATCTCATCCTGATGGAATTTTGAAGATGAAGAAACTTAGAAAAGTTGTCCTCAAAGCACTGCAAGAATCTGGCATTGCAGTGGATGAAGCTCACTTGAGCAAGGCGCTTGAGCAGAAGATCAATTCCAGCTCCAGATTTACAGTCGAGAACAAGTACGTGCGATTGGTGGCTAAAAACTGA | 957 | 0.4316 | MVWFQCEDCGDNLKKPKLSSHFRTCSAYKLSCIDCGEIFGRDTVQDHTQCITEAEKYGPKGQGKTLSAATATPNKDSKQRPEVDINVGLSERPPWFCSLCNTSTTSKQTLLLHADGKKHRAKARAFHASKQQPIQADKSATDDAKTVVESGPNDKVREDSNVEVPKLKESSTQNDSKQGNETSSAKKKRKLEASRDGKSVDLVKKSRKGTSVDMGNGEVIQGEKATGESNLKKEGMLEPCCTITVNKIKLKKFIKSALKSHPDGILKMKKLRKVVLKALQESGIAVDEAHLSKALEQKINSSSRFTVENKYVRLVAKN* | 319 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g2594 | 318 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 58 | IPR036236 | - | |
Vra7g2594 | 318 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1 | 26 | IPR036236 | - | |
Vra7g2594 | 318 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 1 | 26 | - | - | |
Vra7g2594 | 318 | MobiDBLite | consensus disorder prediction | 142 | 165 | - | - | |
Vra7g2594 | 318 | Pfam | Zinc-finger of C2H2 type | 95 | 119 | - | - | |
Vra7g2594 | 318 | PANTHER | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR | 1 | 315 | IPR039999 | GO:0003677 | |
Vra7g2594 | 318 | SMART | ZnF_U1_5 | 92 | 126 | IPR003604 | GO:0003676|GO:0008270 | |
Vra7g2594 | 318 | MobiDBLite | consensus disorder prediction | 181 | 208 | - | - | |
Vra7g2594 | 318 | SUPERFAMILY | beta-beta-alpha zinc fingers | 84 | 127 | IPR036236 | - | |
Vra7g2594 | 318 | MobiDBLite | consensus disorder prediction | 121 | 225 | - | - | |
Vra7g2594 | 318 | Gene3D | Classic Zinc Finger | 89 | 132 | - | - | |
Vra7g2594 | 318 | Pfam | LYAR-type C2HC zinc finger | 30 | 57 | IPR014898 | - | |
Vra7g2594 | 318 | MobiDBLite | consensus disorder prediction | 58 | 82 | - | - | |
Vra7g2594 | 318 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 27 | 51 | - | - | |
Vra7g2594 | 318 | MobiDBLite | consensus disorder prediction | 166 | 180 | - | - | |
Vra7g2594 | 318 | Gene3D | - | 1 | 50 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g2594 | 54 | 234 | C2H2 Transcription Factor Family | AT2G19380 | 36.264 | 1.36e-18 | 84.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g2594 | K15263 | - | gmx:100790272 | 489.96 |