Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2591 ATGGAGGAAATATCTTCGAGTGTTGCAGTACCTTTTACACTTGGTGTTGGAAATTTGATTCAAAAAGAGTCTGCAGTAACAACTCACATGGAGATAACTGGGCTGAAGCTTATGGCAAATACAGCAGCGGCTGCTTTGATGTTAAATCCTGCAGTAGAGTGTTGTCAGTCATATTCTGTTGGAAGTGAAAGCCGTGCAGATGTAAGTCTGCAGCACCAGATCGTGGTATCTGCGGAGGTAAAGGAGAATCAAGTTGGGGATGCCCTTGTCTCAGAAATGGTTATTGAATGTGAGAGTAATTGGGTTTTGAATGAAACCCATCATAAGGCTATAAAGGAAGATGAACTAATGTTAGCTGTGGATTTTCACTGTCTTCATAGTTCAAGCTCTCAGTCTGTGGCTAATGGCCAAAGTGATCCTTGTAGGGAGGAAGCTGTGCCGTTGAAGACTAGTTATTCTGAAATAGAATCTCCAATCATCATGAATGTTGATGATGATGTTCATGGCAAGTCTGGAGTAAACGAACCGTGTCCATCGATGAAGTCAGTGGAGAACACAGTTTCTGTTGCAATGGATATTACTAGTGAGGATCAAAGTGGATCAGATGAGCCTGATCCTAAATCCTCTGCGGTGCTTCTTGACCAGTTGTCTGGGGAGAATAAAGCATGGAGAACGAGCAACAAAAATGCTTTGGAATTGAATAGTGGCCCTCTGTGGGGTTATTCATCAATTTGTGGAATGAGACCGGAGATGGAAGATGTTATCTCTGTTCAGCCTCAACTTTTTCAAGTTCCTTCGCAGATGCTGATGAATGACCACGTATATGAGAACGAAAAACAGACACTAGCCCACTTTTTCGCCGTCTACGATGGGCATGGGGGCCTTCAGGTTGCTAACTACTGCCAGGAACGTCTTCATTCAGTATTGATTGAGGAGATAGAGGCTGCACAATCAAGTTTGGCTGAAACAAATGGGAGAGATGATTGGCAGGACCATTGGAAGAAAGCATTCATCAATTGTTTTCAGAGAGTAGATGATGAGGTTGGAGGAACTGGTGCAAGTAATAATGGAAACAACAGTGGTGGATCTGAGTCTAGTATTGAACCTGTTGCTGCTGAGACTGCTGGTTCCACTGCAGTTGTCGCTATTTTAAGTCAAACCCTCATAATAGTTGCAAATTGTGGAGATTCAAGAACTGTCTTGTACCGTGGAAAAGAGGCCATGCCACTGTCTTCTGACCACAAACCAAATAGAGAGGACGAGCGAGCAAGGATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATATCGAGTTCTTGGTGTCTTGGCAATGTCAAGGTCCATAGGTGATAGATACCTTAAGCCATGGATAATTCCAGAACCTGAAGTGAATATTGTGCGTAGAGAGAAAAATGACGAATGTCTTATTCTAGCAAGTGATGGTTTGTGGGATGTAATGACAAATGAAGAAGCCTGCGAGGTTGCTAGGAAGAGAATCCTTCTTTGGCACAAAAAGTTTGGTGAAAACGGAGCAGCAGGACATAGCGAAGGAGCTGATCCTGCAGCTCAATCTGCTGCAGAGTACCTAACAAAGCTTGCCATCCACAGGGGAAGCCAAGATAACATCTCTGTAATTGTCATAGACTTAAAGGCTCAAAGAAGAATTAAGAGAAAGCCTTAA 1686 0.433 MEEISSSVAVPFTLGVGNLIQKESAVTTHMEITGLKLMANTAAAALMLNPAVECCQSYSVGSESRADVSLQHQIVVSAEVKENQVGDALVSEMVIECESNWVLNETHHKAIKEDELMLAVDFHCLHSSSSQSVANGQSDPCREEAVPLKTSYSEIESPIIMNVDDDVHGKSGVNEPCPSMKSVENTVSVAMDITSEDQSGSDEPDPKSSAVLLDQLSGENKAWRTSNKNALELNSGPLWGYSSICGMRPEMEDVISVQPQLFQVPSQMLMNDHVYENEKQTLAHFFAVYDGHGGLQVANYCQERLHSVLIEEIEAAQSSLAETNGRDDWQDHWKKAFINCFQRVDDEVGGTGASNNGNNSGGSESSIEPVAAETAGSTAVVAILSQTLIIVANCGDSRTVLYRGKEAMPLSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDECLILASDGLWDVMTNEEACEVARKRILLWHKKFGENGAAGHSEGADPAAQSAAEYLTKLAIHRGSQDNISVIVIDLKAQRRIKRKP* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2591 561 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 107 561 - -
Vra7g2591 561 Pfam Protein phosphatase 2C 261 544 IPR001932 -
Vra7g2591 561 MobiDBLite consensus disorder prediction 349 370 - -
Vra7g2591 561 CDD PP2Cc 240 551 IPR001932 -
Vra7g2591 561 Gene3D - 225 561 IPR036457 -
Vra7g2591 561 PANTHER ALPHABET, ISOFORM E-RELATED 107 561 - -
Vra7g2591 561 SMART PP2C_SIG_2 269 551 IPR001932 -
Vra7g2591 561 ProSitePatterns PPM-type phosphatase domain signature. 285 293 IPR000222 GO:0043169
Vra7g2591 561 ProSiteProfiles PPM-type phosphatase domain profile. 238 551 IPR001932 -
Vra7g2591 561 SUPERFAMILY PP2C-like 235 552 IPR036457 -
Vra7g2591 561 SMART PP2C_4 228 549 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2591 Vra-Chr7 46190701 46194447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2591 171 561 PP2C-type Phosphatase Gene Family AT4G26080 54.156 1.14e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2591 K14497 - gmx:100789207 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2591 7 46190701 46194447 Vra7g2591 7 46190701 46194447 ECH
Vra7g2591 7 46190701 46194447 Vra5g0286 5 2686256 2689912 PCT