Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2564 ATGGCGCCTAGAATCCTTCTATGCGGCGACGTTTTAGGTCGCCTGAGCCAACTCTTCAAGCGCGTCTCTTCAGTGAGCAAATCTGCAGGTCCATTCGACGCGCTCTTGTGCGTAGGCCAGTTCTTCCCGGACTCACCGGAGCAACTGGATGAATTCACCGCCTACATTGAAGGAGGATCACAGATTCCGCTTCCGACTTACTTCATCGGAGATTACGGCGTCGCCGCCCCTAAATTTCTCTTACAAGCCTCCAAGGACTCCGCCAACCGCGGCTTCATGATGGACGGCTTCAAGGTTTGCCACAACTTATATTGGTTGAAAGGCAGTGGCAAATTCCCCCTCTTCGGGTTGTCCGTGGCCTATTTATCTGGTAGGAAGTCGGCCAGTGTTCAACAGTTTGGAACTTATACCGAAGATGACGTTGATGCTTTGCGAGCTATTGCAGAGGAACCAGAAATTATTGATCTATTCTTGACTAATGAATGGCCAAGTGGCGTCACCAATGGAGCAGCTGTTTCGGACATTCCTACTGGAGCCTCTGATCTTGTAGGCAGTGATTCAACCATATCGGAGTTAGTACAGGAGATCAAGCCACGTTATCACATTGCAGGCACAAAAGGTATATACTATGCCCGTGAACCATATACCAATGTTGATGCTGTGCATATCACCCGTTTCATAGGGCTTGCATCTGTTGGAAATAGAAACAAACAGAAATTTATTCATGCAATCTCCCCCACACCTTCTTCGGCCATGTCTTCAACTGAGATTGCTATGAAAACCACAAATACCACCTTATCACCTTACACATTTGTGGAGAAAAGAACACCTCCTATGGATTCCACGAAGAGATCCAGTGACTCTATCTCTGAGTCTCAATATTGGAGATATGATGTTTCTCAAAAGCGACAAAAACATGAAACTGGACAAGCTGATAAGATGTGTTTCAAATTTGTCTCTTCTGGATCTTGTTCACGTGGAGAGAAGTGCCATTTTCATCATGATACAGATGCAAGGGAGCAGTGTAAGAGAGGTGTTTGTTTAGATTTTTTGATTAAGGGAAAATGTGAAAGGGGGCCAGACTGCAATTATAAGCACAACTTGCTGGATGAAGGTGACAAGGATCCTTCTAGGAGGTCCGGATCGGGCAGCTCAAAAGAATGTTGGTTTTGCTTGTCAAGCCCAAATGTGAAGACACATTTAATTGTTAGCATTGGGGAGGATTATTACTTGGCACTGGCTAAAGGTCCACTTGTTGAGGACCATGCACTGATAATACCCGTTGAGCATAGGTTTAATACCTTATCTATGTCTTCTGAATCTGAAACTGAGCTCTCTAGGTTCCAGAACAGTCTCAAGAGTTACTGCAGAGGCCAAGAAAAGGAAGTGATATTTTTTGAGTGGGCCTCCTTGCGTGACACTCATGCCAATCTTCAGGCCATTCCCATTCCATCTTCCAAAGCGGTTATGGTTGAAAAAGTGTTCAATTTAGCTGCAGAAAAGTTGGGATTTGAATTTGTGGCCAAGACATTTGATAGCATTTCTGATGGAAGGAAGTTTTTGAAGACTCAAATTGGTGGGGGTTTAAGTTTGTTCTATGCTCAGGTTCCAGGAGGGAAAATTCTGCTGCATCACGTTGAAAAGAACGAGAAATTTCCTGTCCAATTCGGCCGTGAGGTCATGGCTGGGTTGCTCAATATGGCAGATAATGCAGATTGGAGGAGTCACAGACATAGCAAAGATGAGGAAATGAAAATTGTTGAAAATTTCAAGAGTCGATTTCAAGAATATGATCCAAACTGCTAA 1806 0.4435 MAPRILLCGDVLGRLSQLFKRVSSVSKSAGPFDALLCVGQFFPDSPEQLDEFTAYIEGGSQIPLPTYFIGDYGVAAPKFLLQASKDSANRGFMMDGFKVCHNLYWLKGSGKFPLFGLSVAYLSGRKSASVQQFGTYTEDDVDALRAIAEEPEIIDLFLTNEWPSGVTNGAAVSDIPTGASDLVGSDSTISELVQEIKPRYHIAGTKGIYYAREPYTNVDAVHITRFIGLASVGNRNKQKFIHAISPTPSSAMSSTEIAMKTTNTTLSPYTFVEKRTPPMDSTKRSSDSISESQYWRYDVSQKRQKHETGQADKMCFKFVSSGSCSRGEKCHFHHDTDAREQCKRGVCLDFLIKGKCERGPDCNYKHNLLDEGDKDPSRRSGSGSSKECWFCLSSPNVKTHLIVSIGEDYYLALAKGPLVEDHALIIPVEHRFNTLSMSSESETELSRFQNSLKSYCRGQEKEVIFFEWASLRDTHANLQAIPIPSSKAVMVEKVFNLAAEKLGFEFVAKTFDSISDGRKFLKTQIGGGLSLFYAQVPGGKILLHHVEKNEKFPVQFGREVMAGLLNMADNADWRSHRHSKDEEMKIVENFKSRFQEYDPNC* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2564 601 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 1 600 IPR040194 -
Vra7g2564 601 PANTHER CWF19-LIKE PROTEIN 1 1 600 - -
Vra7g2564 601 SUPERFAMILY HIT-like 386 454 IPR036265 -
Vra7g2564 601 SMART c3hfinal6 311 336 IPR000571 GO:0046872
Vra7g2564 601 SMART c3hfinal6 343 368 IPR000571 GO:0046872
Vra7g2564 601 ProSiteProfiles Zinc finger C3H1-type profile. 309 337 IPR000571 GO:0046872
Vra7g2564 601 Pfam Protein similar to CwfJ C-terminus 1 384 495 IPR006768 -
Vra7g2564 601 CDD MPP_CWF19_N 6 232 - -
Vra7g2564 601 ProSiteProfiles Zinc finger C3H1-type profile. 341 369 IPR000571 GO:0046872
Vra7g2564 601 SUPERFAMILY CCCH zinc finger 312 336 IPR036855 GO:0046872
Vra7g2564 601 Gene3D - 298 368 - -
Vra7g2564 601 Pfam Protein similar to CwfJ C-terminus 2 520 598 IPR006767 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vra7g2564 CwfJ_C_1 3e-35 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2564 K24939 - gmx:100782106 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2564 7 45949898 45958199 Vra7g2564 7 45949898 45958199 ECH