Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2529 ATGTCTTCGTGTTTGACCGGAGCTGGAGGAAGAACCTACGGATTCGATTTCGAATTTGTTAAATCTCCGTCTTCCTCCACCAGAACCTCACACACCTCTTCTTCGCCTTCTTCAACAATCTCCGAATCGAGCAATTCGGCTGCGCTCGCAATCTCCACCAAGAAACCCAGAACTCAGAGAAAGCGGCCGAACCAAACCTACAATGAAGCAGCTGCACTTCTATCCACGGCCTACCCGAACCTCTTTTCTGCAAAGAACCTCAAAACGCAGGGGAAATTCGCAAAGCCCGCATCGGAGAATTTCGATTATGACTCTTCGGAGCTGTTTTTGCCGTTCAGGGTTTTGGACGGATCGTCTTCGTGTTTCCTTCTGGACCAACCGGGCCCCAAGCCCATGGAGAGGCCCAAAGTGGTGAGTGTGCAGGAGAAGGCGTGTGGGAGCCCCGGGGAGATAAGCTCCGTAGTCAATTTCAATTCCCTCGAATTGAACGACGATTGCGAAGAGAGCCTTGACGCGGAATCGATTCTCGACGAGGAAATTGAAGAAGGGATCGATAGCATCATGGGGAGCAGGGTCCAAGAAATCTCCAACGACGCCGTCAATAACTTTCCCTGGATAATGCCTTTTGGCGGGAAATCGGACTTCCCCAGACCCCGTGTCAGTGCTCTCCGACACGTCGACGACGGAAACTGGTGGAATTTTCCGGCCGTCGATATTCATCAGATATCTCCCAAAATTAACACCAAGCCTCCTCCGGTGACCGCCGACAAGAAGATGAAGAAGAAGAAGGTGACAGCGATTGCGGCGACGGAGAAACCGGCCGTGGTGGAGTTGAAGAACGCTGAATTGCCCAAACCGAAACAAGGTTTGATGTTGAAATTGAATTACGAAGACGTTCGGAGCGCTTGGTCCCACCGAGGGATACCGTTCGCAGACGATAGCCCTTTGGCCGACTTGCCGGAAACTGACGTCACGGCGCGGCTGTCGCAAATTGATTTGTGGTGGGACAATGGCGGAGTGAGAGAAGCTAGCGTGCAGCGCTACAAAGAAAAGCGGCGAACGCGACTGTTCTCGAAGAAGATCAGATACCAGGTGAGGAAGGTCAACGCAGATCGACGGCCCAGAATGAAGGAAGCGATGAGAGTAAAAGGAAATCACCTTGACCGTTGA 1170 0.5222 MSSCLTGAGGRTYGFDFEFVKSPSSSTRTSHTSSSPSSTISESSNSAALAISTKKPRTQRKRPNQTYNEAAALLSTAYPNLFSAKNLKTQGKFAKPASENFDYDSSELFLPFRVLDGSSSCFLLDQPGPKPMERPKVVSVQEKACGSPGEISSVVNFNSLELNDDCEESLDAESILDEEIEEGIDSIMGSRVQEISNDAVNNFPWIMPFGGKSDFPRPRVSALRHVDDGNWWNFPAVDIHQISPKINTKPPPVTADKKMKKKKVTAIAATEKPAVVELKNAELPKPKQGLMLKLNYEDVRSAWSHRGIPFADDSPLADLPETDVTARLSQIDLWWDNGGVREASVQRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKEAMRVKGNHLDR* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2529 389 MobiDBLite consensus disorder prediction 22 64 - -
Vra7g2529 389 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 382 - -
Vra7g2529 389 MobiDBLite consensus disorder prediction 22 53 - -
Vra7g2529 389 Pfam CCT motif 341 377 IPR010402 GO:0005515
Vra7g2529 389 ProSiteProfiles CCT domain profile. 341 383 IPR010402 GO:0005515
Vra7g2529 389 PANTHER OS02G0148000 PROTEIN 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2529 Vra-Chr7 45586034 45589853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2529 285 377 C2C2-CO-like Transcription Factor Family AT1G68520 44.545 5.25e-18 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g2529 CCT 3.6e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2529 - - gmx:100810303 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2529 7 45586034 45589853 Vra7g2529 7 45586034 45589853 ECH