Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2523 ATGATTTATGTGAGTGAAAAACTGCTGGCTACTTTGATCAGAGTGAGTGGTCATTGCTGGTTGGCATTGACCGGACTTGACACAGATCTTGTAAGCTACTGGAGTTGGGATTGGTTGGTTAAAATGAGATTGTTGGAGTTTGGGTGTGTGTTGGTTGTTGTATCTGCACTTCTGGTTTCTGGGGATGCTGAGATTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTACACTGGAGGTATTAGTGGGTTTGAAGCTACTGCAGTGGAATCTGATGAGAAGATTGATACCGAAAGTGAATTGGTTACTTCATATGCTCGCCATCTTGAGAAAAAACATGACATGCTGCTTGGTTTGCTGTTTGAGGAAGGGACATACCAGAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTTCATATTTCACCGGAACAGGCAGAAACTCTGAGACGTGCTCCGGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAAACATACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACTGGAGGGGGCTTTGATAGGGCTGGAGAAGACATTGTCATTGGATTTGTGGACTCAGGGATCTATCCTCATCACCCAAGTTTTGCAACTCATAATGCTGAGCCATATGGGCCTGTTCCAAAATATAGAGGAAAATGTGAAGCTGATCCGGATACTAAAAGAAGTTACTGCAACGGCAAGATTGTTGGAGCACAACATTTTGCTCAGGCTGCAATAGCTGCTGGGGCATTTAACCCTATAATTGACTTTGCGTCTCCTCTAGATGGTGATGGGCATGGAAGTCATACCGCCTCTATTGCAGCTGGAAATAATGGAATTCCTGTGAGAATGCATGGACATGAATTTGGGAGAGCCAGTGGGATGGCACCTCGTGCTAGGATTGCTGTGTACAAGGCACTTTATAGACTGTTTGGAGGGTATGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTATATGACGGAGTGGATATACTCAGCCTTTCAGTTGGACCCAACAGTCCTCCAGCAGCCACCAGAACTACCTTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTCGCACAGGCTGCTGGAAATGGTGGTCCTTTTCCGAAGACAATGGTTTCATATAGTCCATGGATAGCATCGGTAGCAGCTGCAATTGATGATCGTAGATATAAAAATCATTTGATGCTTGGAAATGGAAAAATCTTAGCTGGAATTGGGTTGTCACCTTCCACACATTTGAACGAAACATATACATTGGTTGCTGCAAATGATGTGTTGCTAGATTCTTCAGTTATGAGGTACAGCCCCACAGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAAAGGGAAATATTCTTCTCTGTGGTTATTCCTTCAATTTTGTTGTTGGCACTGCATCAATCAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGGTTTGTTCTTTGTGTTGAAAATGTTTCCCCAGGAACAAAATTTGATCCAGTCCCTGTCGGCCTTCCTGGGATTCTCGTCACAGATGCCAGCTATTCAAAGGAGCTTATAAATTATTATAATATCACTACACCAAGAGATTGGACTGGACGGGTAAAGAGGTTTGAAGGTACAGGTAAAATTGGTGATGGTTTAATGCCTATTCTGCATAAATCTGCACCACAGGTGGCATTATTCTCTGCACGAGGACCAAATATAAAGGATTTCAGTTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAGGGGTTTGCCATGATCTCTGGAACTAGCATGTCTGCACCACATATAGCTGGAATAGCTGCTCTTATAAAGCAGAAGCATCCTCATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCTCTTCTTGCCCAGCAAACATCTGAATCAGAAGCTATGAAGCTGGTCAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTGATCCAACAGCTGCCTTGGACCCTGGACTCATCTTTGATGCAGGATACAAGGACTATCTGGGCTTCTTGTGCACAACACCGGGTATTGACATTCATGAGATAAGGAACTACACTCACACACCATGTAACACCACCATGGGCAAGCCATCAAATTTAAACACCCCTTCTATCACAATTTCCCATCTGGTGAGAACTCAAGTTGTCACACGCACGGTCACAAATGTCGCCGAAGAAGAAACCTATGTGATCACGGCCAGAATGGAGCCGGCTGTTGCCATTGAAGTCAACCCTCCGGCAATGACTATCAAAGCAGGTGCATCGCGACAGTTTTCAGTGACACTGACAGTTCGGTCAGTGAGAGGAACCTATAGTTTTGGAGAGGTTTTGATGAAAGGGAACAGAGGGCACAAGGTGAGGATTCCTGTTCTGGCCAATGGATACCGAAGATAG 2577 0.4428 MIYVSEKLLATLIRVSGHCWLALTGLDTDLVSYWSWDWLVKMRLLEFGCVLVVVSALLVSGDAEIYIVTVEGEPIISYTGGISGFEATAVESDEKIDTESELVTSYARHLEKKHDMLLGLLFEEGTYQKLYSYRHLINGFAVHISPEQAETLRRAPGVKSVERDWKVRKHTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNAEPYGPVPKYRGKCEADPDTKRSYCNGKIVGAQHFAQAAIAAGAFNPIIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGYVADVVAAIDQAVYDGVDILSLSVGPNSPPAATRTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLMLGNGKILAGIGLSPSTHLNETYTLVAANDVLLDSSVMRYSPTDCQRPELLNKNLIKGNILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILVTDASYSKELINYYNITTPRDWTGRVKRFEGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEGFAMISGTSMSAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSESEAMKLVKATPFDYGSGHVDPTAALDPGLIFDAGYKDYLGFLCTTPGIDIHEIRNYTHTPCNTTMGKPSNLNTPSITISHLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVTLTVRSVRGTYSFGEVLMKGNRGHKVRIPVLANGYRR* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2523 858 SUPERFAMILY Subtilisin-like 170 719 IPR036852 GO:0004252|GO:0006508
Vra7g2523 858 Gene3D - 732 855 - -
Vra7g2523 858 SUPERFAMILY Protease propeptides/inhibitors 127 168 - -
Vra7g2523 858 ProSiteProfiles Serine proteases, subtilase domain profile. 164 715 - -
Vra7g2523 858 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 200 211 IPR023827 -
Vra7g2523 858 Pfam Subtilase family 195 679 IPR000209 GO:0006508|GO:0008236
Vra7g2523 858 ProSitePatterns Serine proteases, subtilase family, serine active site. 638 648 IPR023828 -
Vra7g2523 858 PRINTS Subtilisin serine protease family (S8) signature 195 214 IPR015500 -
Vra7g2523 858 PRINTS Subtilisin serine protease family (S8) signature 274 287 IPR015500 -
Vra7g2523 858 PRINTS Subtilisin serine protease family (S8) signature 637 653 IPR015500 -
Vra7g2523 858 Gene3D Peptidase S8/S53 domain 197 728 IPR036852 GO:0004252|GO:0006508
Vra7g2523 858 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 59 170 IPR037045 -
Vra7g2523 858 PANTHER CUCUMISIN-RELATED 55 857 - -
Vra7g2523 858 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 55 857 IPR045051 -
Vra7g2523 858 CDD Peptidases_S8_3 167 674 IPR034197 -
Vra7g2523 858 Pfam Fibronectin type-III domain 760 852 IPR041469 -
Vra7g2523 858 CDD PA_subtilisin_like 419 555 - -
Vra7g2523 858 Pfam Peptidase inhibitor I9 66 169 IPR010259 -
Vra7g2523 858 Gene3D - 410 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2523 Vra-Chr7 45532745 45539665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2523 45 858 Subtilisin-like Serine Gene Family AT4G30020 80.025 0.0 1358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2523 - - gmx:100787619 1533.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2523 7 45532745 45539665 Vra7g2523 7 45532745 45539665 ECH
Vra7g2523 7 45532745 45539665 Vra5g0345 5 3401302 3408069 PCT