Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2512 ATGTCCGTAACCGTGAAAGCATGCTGCACTGTGAGGCCAATGGAGGCAACATGGTGCGGACGCGTACCTTTATCTGAATGGGATCAAACAGGCAAAGTAACCCACGTGCCCATCATCTACTTCTACCGTCTTCCACAAAACTGCCTCTCTCAATACAACACCATTGCTTCCACCTTGAAGGACTCATTAAGCCGAGTCCTGGTGCCATTTTATCCACTTGCCGGTCGTTTGCGTTGGACAAACAATGGACGTTTAGAAATTGATTGCAATGCCACCGGCGTTCGATTCATTGAAGCCGAATCATCATCAACCTTACAACATCTCACTGATTATTCATCTTGTTCGGAACACCACTACCTTGTCCCTGCTGTGGACTACTACTCCCTACCAATTCACGAGTTGCCGTTGGTTGTGGTTCAGCTGACGAAGTTAAAGTGCGGTGGCATTTGTATTGGCATAACACTTTCGCACGCAGTTGTGGATGGACCAAGTGCACTGCACTTCGTATTTGAATGGGCAAGGCTTTCACGGGGAGAGCCTCTGCATACGGTGCCATTCCTTGACCGGAAAATTTTGCGTGCTGGGGAGCCTCCTTTGGTGCCACTAACAAAATGTGACGTTCACACGGAGTTCAATGATCTGCCCTTCTTGCTGGGCCGAACTGATAACAGAGAGGAAAGGGAGAAGGAAACAACGATGGCTTTCGTTAAAATAAGCAAAACTCAAATTGAAAGATTGCAAAAGAGAGCAAATGAGAGTTCGCCTAGGCCTAGAAATGATCGTGGTTATTCCCGTTATGAGAGTGTGACTAGTCACATATGGAGATGTGCAAGCAAGGCAAGGGAGCACAAAGAGAACCAACCAACAGTTCTTACTGTTATAGTTGACTTGAGGGGTCGCATGAAACCTCCTTTGCCAGAAGGGTACTTCGGGAATGCGAATTTGGATAGTGTTGCATGTAGTCTTGCGGGTGATTTGGTGTCAGAGCCTTTGGGGTATACGGCGAGTAGAATAAGGGAGGCGATTGAGAGGGTGAAGGATGAGTACGTGAGGTCGGGGATTGAGTTCTTGAAGAATCAAGAGAATATAAGAAGGTTTCATCAAGATCTTCACGAAGAAGGGAGAGAGAAGAAGCCTTTCTTTGGGAACCCGAATTTGTCTGTGGTAAGTTGGTTGAGGTTGCCTATCTACGGCATTGATTTTGGGTGGGGGAAGGAGGTTCGTATGAGTCCAGCAACACATGACTTCGATGGAGATTTCGTGCTTCTTCCTGATCCTGATGAGGATGGCTCTATGCTGGTTTGTATAGGTCTGCAAGCGGTGCATCTTGATGCATTTAAGAAGTATTTTTACGATGACCTTGCATAA 1368 0.4678 MSVTVKACCTVRPMEATWCGRVPLSEWDQTGKVTHVPIIYFYRLPQNCLSQYNTIASTLKDSLSRVLVPFYPLAGRLRWTNNGRLEIDCNATGVRFIEAESSSTLQHLTDYSSCSEHHYLVPAVDYYSLPIHELPLVVVQLTKLKCGGICIGITLSHAVVDGPSALHFVFEWARLSRGEPLHTVPFLDRKILRAGEPPLVPLTKCDVHTEFNDLPFLLGRTDNREEREKETTMAFVKISKTQIERLQKRANESSPRPRNDRGYSRYESVTSHIWRCASKAREHKENQPTVLTVIVDLRGRMKPPLPEGYFGNANLDSVACSLAGDLVSEPLGYTASRIREAIERVKDEYVRSGIEFLKNQENIRRFHQDLHEEGREKKPFFGNPNLSVVSWLRLPIYGIDFGWGKEVRMSPATHDFDGDFVLLPDPDEDGSMLVCIGLQAVHLDAFKKYFYDDLA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2512 455 Pfam Transferase family 1 452 - -
Vra7g2512 455 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 453 - -
Vra7g2512 455 Gene3D - 1 211 IPR023213 -
Vra7g2512 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 453 - -
Vra7g2512 455 Gene3D - 220 453 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2512 Vra-Chr7 45407636 45409003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2512 1 452 Monolignol Biosynthesis Gene Families AT5G48930 35.398 2.30e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2512 K13065 - gmx:100777532 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2512 7 45407636 45409003 Vra7g2512 7 45407636 45409003 ECH