Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2483 ATGGATACTGACGAGGAGTGCTCAATTGTTCTTGAATTACCTGAAACGGATACTTTCTTTGACAAAAAGAAGAAATTACTACAAAGTAAGGGTTTTAGTCCCAAAGAACGGATATGCCTCAGGAGCTCTTCAAAACCTGACTGGATGAGTGCTACTGTGGAGGTGTTACTTCAGATTGCTCGGATCATACAATTAAATGAGCTGGAACTTTATTTTGCTGAAGAGGACATATGCATGTCGATGGAATTTTACAGTCTCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCACTGACATATCACTTTCTAGATGTTCACATCTCAATAAAAATATCCTGCAAGGGTTACGCCAAACAATTCTTGATTTAATTACTGATTTGGGGGTCAAAAACAGTGTGACGGGGGGAGTAGTTCAAAAAGACCATAGTTGTGACCAAGAAGAACGCTTGATAGAATGGGGTGAAAGCAATGGCGTAAAGACACAGTTAAAAATAGCTTATATTGAAGGAGCTGGTCGAGGTGCAATAGCAAGGAAAGATCTAAACGTTGGAGACATTGCTTTGGAAATTCCTGTGTCAATTATCATTTCTGAGGAGCTTATTCATGAAACTGAAATGTATGGTGTCTTAAAAGAAATTGACGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAAAAGTACAACAGTGATTCAAAATTCAAAATTTATTTTGACACACTCCCAGAAAAATTTAATACAGGTTTGAGTTTCAGCATTGAAGCAATTACAGTGTTAGACGGAACCTTGCTGTTGGAAGAGTTAATGCAAGCAAGACAGCACCTGCATGCTCAATATGATGAGTTGTTCCCTGCTCTGTGCAATACTTTTCCTGATATATTTCCACCAGAGCTGTACACATGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTATTCTAATAGCATGAAGATAATGTATTCCGATGGAAAGATAAAAACATGCTTGATCCCTATTGCTGGATTTCTCAATCATTCACTGTGCCCGCATGTCATGCACTATGGCCAAGTGGATCCTGCAAAAAATTCACTGAAATTTTGTCTATCAAGACCATGCAAATCTGGAGAGGAATGCTGCTTAAGCTACGGCAACTTCTCCAGCTCTCATCTAATAACCTTTTATGGTTTTTTACCACAAGGAGACAACCCATATGATGTTATTCCGTTAGACATTGACGGTGCCGACGTTGATTCTCATGAGAATATACCCAAGTCCAACTGGACGAGTCACATGGTGCGTGGTACCTGGCTCTCCAGGGATCACAAGATATTCTACTATGGTCTCCCCTCACCATTATTGGACCATCTTCGGAGATCTCGAAGTCCAATGCTGCGAACAAAGACCTTTTTGCAAGAAAACTTGGAAAATGAGCTGGAAGTTCTTGAAAATCTCAAAGATATCTTCGATGACATGATTGAAAATATGGGCGAAATCGATCTTAATGACAGAGAAAACTGCTGTTGGGATGAAAAATTGGCTATGGATTTTAAAAGTACACAAAGACGAATTGCCTGTTCTGTTTCAACCTCGTGTCTCGCTGGTATGGATATGTTAAAGAACGAACTATGCAAGTGCATGGCTGAGGACATCCTAGGCTAA 1653 0.3956 MDTDEECSIVLELPETDTFFDKKKKLLQSKGFSPKERICLRSSSKPDWMSATVEVLLQIARIIQLNELELYFAEEDICMSMEFYSLRNELEALNSIVLLTDISLSRCSHLNKNILQGLRQTILDLITDLGVKNSVTGGVVQKDHSCDQEERLIEWGESNGVKTQLKIAYIEGAGRGAIARKDLNVGDIALEIPVSIIISEELIHETEMYGVLKEIDGISSETILLLWSMKEKYNSDSKFKIYFDTLPEKFNTGLSFSIEAITVLDGTLLLEELMQARQHLHAQYDELFPALCNTFPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKIKTCLIPIAGFLNHSLCPHVMHYGQVDPAKNSLKFCLSRPCKSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDIDGADVDSHENIPKSNWTSHMVRGTWLSRDHKIFYYGLPSPLLDHLRRSRSPMLRTKTFLQENLENELEVLENLKDIFDDMIENMGEIDLNDRENCCWDEKLAMDFKSTQRRIACSVSTSCLAGMDMLKNELCKCMAEDILG* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2483 550 Coils Coil 465 492 - -
Vra7g2483 550 Pfam SET domain 174 381 IPR001214 GO:0005515
Vra7g2483 550 SUPERFAMILY SET domain 149 402 IPR046341 -
Vra7g2483 550 Gene3D set domain protein methyltransferase, domain 1 113 394 - -
Vra7g2483 550 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 546 - -
Vra7g2483 550 Gene3D - 2 112 IPR036464 -
Vra7g2483 550 CDD SET_LSMT 165 395 - -
Vra7g2483 550 ProSiteProfiles SET domain profile. 163 381 IPR001214 GO:0005515
Vra7g2483 550 PANTHER BNAA07G01600D PROTEIN 3 546 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra7g2483 SET 5.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2483 K19199 - gmx:100778605 997.267