Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2477 ATGTATTATCAAAAAATTGTCCAAAAAAAATTGTTAAACAAACTTTTTCCTATTTTCCCCTTTACCATCTCATCTTCACTCCCATTCACATTCTTCACCACCCAAACCAACAACATAGCAACCACAACCAAATTGGAACAACAACACCACAACCATGACTTCATCTTCCGTTCCAAACTGCCCGACATTTACATTCCCACGCACCTCCCTCTCCACTCTTACATCTTCCAAAACCTCTCCCAGTTCAACCATCGACCCTGCCTCATCAACGCCGCCACCGGAGACTGCTTCACTTACGCCGACGTCCACCTCACCGCTCGCAGAGTCGCCGCCGGCCTCAACAAACTCGGCATCCAACACAGCGACGTCATCCTCCTTCTCCTCCAGAACTGCCCCCAGTTCATCTTCGCATTCCTGGGCTCCTCCTTCTGCGGCGCCACCATCACCACCGCTAACCCCTTCTGCACTCCGGCGGAGGTGGCCAAGCAAGCCGCGGCCTCCAACGCCAAACTCATCATAACACAGGCGTCCTACGTGGACAAAGTGAAGGATTTCGCGAGCGAAAACGACGTCAGAGTGATGTGCGTTGACGGGGCGCCGGAAGGTTTCCTTCAGTTCTCGGAGTTAACGAAGGCAAACGAGAATGACATTCACGGCGTTAAAATATCCCCAGATGACGTGGTTGCGCTGCTGTATTCTTCTGGAACGACGGGGCTTCCGAAGGGAGTGATGCTAACGCACAAGGGGCTGATTACGAGCGTGGCGCAACAAGTGGACGGAGAGAACCCTAATCTGTATATACGCAGCGAGGACGTGGTGTTGTGCGTGCTTCCACTTTTCCATATTTTTTCCCTCAGCATTGTTTTGCTCTGTTCCCTTCGAGTTGGGGCTGCAATTTTGATAATGCCCAAATTCGATATAGTAAAATTGATGGAGCTGGTGGAAAAACACAAGGTGAGCGTGGCACCATTTGTGCCACCCATGATTTTGGCTATTGCCAAAAGTCCAGATTTGCAGCTTTACGACCTGTCGTCGATTCGACTGATTATGTCTGGCGCCGCTCCTGTGGGAAAGGAACTTGAGGATTCTGTCAGGGCCAAACTTCCCAACGCCATTCTTGGACAGGGTTATGGGATGACAGAAGCAGGACCAGTGCTTTCAATGTGCTTAGCGTTTGCGAAGGAAGCATGGCATGTGAAATCAGGTTCGTGCGGGACCGTTGTAAGAAATGCAGAGATGAAGATCGTTGACCCTCTCACTGGTGCTTCGCTTCACACAAATCAAGCTGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTTACCTAAACGATGAAGAAGCCACAAAAATAACTATAGACGAAGAAGGATGGTTGCATACGGGTGATATTGGATACATCGACGATGATGACCAGATTTTCATCGTTGATCGGTTGAAGGAGTTGATCAAATACAAAGGATTTCAAGTTGCTCCTTCCGAGCTCGAAGACATGCTAATTGTGCACCCAAAGATTTCTGATGCTGCCGTTGTGTCCATGAAGGATGAAGCTGCAGGAGAGGTTCCGGTTGCATTTGTTGTACTATCAAATGGTTCAAAAATCTCTGAGGAAGAAATCAAGCAGTACATCTCAAAGCAGGTTGTGTTCTACAAAAGAATCAGTAGAGTTTTCTTTGTGAGTTCAATTCCGAAGGCAGCCTCTGGAAAGATCTTGCGAAGAGAACTGAGGGCAAGGCTTGCAAATGGTATTCCTTCATTGTGA 1764 0.4841 MYYQKIVQKKLLNKLFPIFPFTISSSLPFTFFTTQTNNIATTTKLEQQHHNHDFIFRSKLPDIYIPTHLPLHSYIFQNLSQFNHRPCLINAATGDCFTYADVHLTARRVAAGLNKLGIQHSDVILLLLQNCPQFIFAFLGSSFCGATITTANPFCTPAEVAKQAAASNAKLIITQASYVDKVKDFASENDVRVMCVDGAPEGFLQFSELTKANENDIHGVKISPDDVVALLYSSGTTGLPKGVMLTHKGLITSVAQQVDGENPNLYIRSEDVVLCVLPLFHIFSLSIVLLCSLRVGAAILIMPKFDIVKLMELVEKHKVSVAPFVPPMILAIAKSPDLQLYDLSSIRLIMSGAAPVGKELEDSVRAKLPNAILGQGYGMTEAGPVLSMCLAFAKEAWHVKSGSCGTVVRNAEMKIVDPLTGASLHTNQAGEICIRGNQIMKGYLNDEEATKITIDEEGWLHTGDIGYIDDDDQIFIVDRLKELIKYKGFQVAPSELEDMLIVHPKISDAAVVSMKDEAAGEVPVAFVVLSNGSKISEEEIKQYISKQVVFYKRISRVFFVSSIPKAASGKILRRELRARLANGIPSL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2477 587 Gene3D - 46 480 IPR042099 -
Vra7g2477 587 Pfam AMP-binding enzyme C-terminal domain 495 570 IPR025110 -
Vra7g2477 587 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 51 580 - -
Vra7g2477 587 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
Vra7g2477 587 Pfam AMP-binding enzyme 78 486 IPR000873 -
Vra7g2477 587 CDD 4CL 65 576 - -
Vra7g2477 587 Gene3D - 481 583 IPR045851 -
Vra7g2477 587 SUPERFAMILY Acetyl-CoA synthetase-like 50 583 - -
Vra7g2477 587 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 51 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2477 Vra-Chr7 45016051 45021560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2477 35 548 Monolignol Biosynthesis Gene Families AT1G51680 66.284 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2477 K01904 - gmx:100780741 872.078