Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2475 ATGCCACCAACAGCAACAATGGAACCTTCTCCACAAGAATTCATCTTCAGATCCCCACTTCCCGATATTCCCATTCCCACGCACCTTCCACTACACTCTTACTGCTTCCAAAACCTCTCCCAATTCCAACACCGAACATGCCTTATCGACGGCGACACCGGCGAAACACTCACCTACGCCGAAGTCGACCTCGCCGCCCGCCGCATCGCCGCCGGCCTCCACAACATCGGCATCCGCCAGGGTGACGTCGTCATGCTCGTCCTGCGCAACTGCCCCCAATTCGCCCTTGCCTTCCTCGGCGCCTCCCACCGCGGCGCCGTAATCACCACTGCCAACCCCTTCTACACTCCGCTGGAGCTGGCCAAGCAAGCCACCGCCACCAAAACCAGGCTCGTCATAACGCAATCCGCGTACGTGGACAAAATCAAGAGCTTCGCCGACAGCACTGACATCACGGTCATGTGCATCGACACATGTCCCCCCGAGAACGACGGCGTCTTGCATTTCTCCACGCTAACTAACGCCGACGAAACGGAAGCCCCCGCCGTTAAGATTAGCCCTGACGACCTCGTCGCGCTTCCGTTTTCTTCTGGTACTTCGGGGCTCCCCAAGGGCGTTATGTTGTCGCATAAAAACTTGGTCACCACTATCGCGCAGTTAGTTGACGGCGAAAACGCGCACCAGTACACTCACAGCGAGGATGTGCTCCTCTGCGTGCTGCCTATGTTTCATATCTATGCTCTCAATTCAATTTTACTCACCGGGATTCGATCCGGTGCCGCCGTTCTCATTGTGCAGAAGTTTGAGATGACGACTCTGTTGGAGCTGATCCAGAAGTACAGGGTAACGGTTGCGTCGTTTGTGCCACCCATCGTTTTGGCGTTGGTTAAGAGCGGAGAGGCCCACCGGTACGACCTCTCGTCCGTTCGAGCCGTCGTCACCGGCGCCGCACCCTTGGGAAAGGAACTACAAGAAGCTGTGGAATCAAGGCTACCACACGCCACTTTTGGACAGGGGTATGGGATGACAGAAGCAGGACCACTTGCGATTAGCATGGCATTTGCAAAAGAACCCTCAAAGATAAAACCTGGTGCATGCGGAACCGTTGTCAGAAACGCTGAGATGAAAATCGTCGACACAGAAACTGGTGTTTCCCTTCCCAGAAACGAAACCGGTGAAATTTGCATAAGAGGCACGAAGGTTATGAAAGGATATCTAAACGACCCAGAGGCCACAGAGAGAACCATAGACAAAGATGGATGGCTCCACACAGGAGATATTGGTTACATCGACGATGATGACGAAATCTTCATTGTTGATAGGTTAAAGGAATTGATCAAATACAAAGGCTTCCAAGTACCTCCCGCTGAGCTCGAAGCATTGTTAATTGCTCACCCAGACATCTCTGAAGCTGCCGTTGTACCCATGAAAGATGAAGCTGCGGGAGAAATTCCTGTTGCATTTGTGGTAAGATCAAAAGGTTCTGAGATCAGTGAAGATGAGATAAAGAAATACATTTCACAACAGGTGGTGTTTTACAAGAGAATTGGTAGGGTTTTCTTCACCGACTCTATTCCTAAAGCAGCCTCAGGCAAAATTCTGAGGAAGGTACTAAGTGCAAGAGTTAACGAAGGTGTGTTGGTGGCCAATTAG 1653 0.5178 MPPTATMEPSPQEFIFRSPLPDIPIPTHLPLHSYCFQNLSQFQHRTCLIDGDTGETLTYAEVDLAARRIAAGLHNIGIRQGDVVMLVLRNCPQFALAFLGASHRGAVITTANPFYTPLELAKQATATKTRLVITQSAYVDKIKSFADSTDITVMCIDTCPPENDGVLHFSTLTNADETEAPAVKISPDDLVALPFSSGTSGLPKGVMLSHKNLVTTIAQLVDGENAHQYTHSEDVLLCVLPMFHIYALNSILLTGIRSGAAVLIVQKFEMTTLLELIQKYRVTVASFVPPIVLALVKSGEAHRYDLSSVRAVVTGAAPLGKELQEAVESRLPHATFGQGYGMTEAGPLAISMAFAKEPSKIKPGACGTVVRNAEMKIVDTETGVSLPRNETGEICIRGTKVMKGYLNDPEATERTIDKDGWLHTGDIGYIDDDDEIFIVDRLKELIKYKGFQVPPAELEALLIAHPDISEAAVVPMKDEAAGEIPVAFVVRSKGSEISEDEIKKYISQQVVFYKRIGRVFFTDSIPKAASGKILRKVLSARVNEGVLVAN* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2475 550 CDD 4CL 25 538 - -
Vra7g2475 550 Gene3D - 443 547 IPR045851 -
Vra7g2475 550 SUPERFAMILY Acetyl-CoA synthetase-like 13 544 - -
Vra7g2475 550 Pfam AMP-binding enzyme 38 448 IPR000873 -
Vra7g2475 550 Gene3D - 10 442 IPR042099 -
Vra7g2475 550 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 10 542 - -
Vra7g2475 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 542 - -
Vra7g2475 550 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Vra7g2475 550 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2475 Vra-Chr7 45000758 45005144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2475 13 510 Monolignol Biosynthesis Gene Families AT1G51680 65.149 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2475 K01904 - gmx:548034 952.584