Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2395 ATGCCGTCGCGTTGTGAAATATGCTGCGAGATAATGATCGCGATCTTGCTTCCTCCAATCGGAGTTTGCTTTCGCCACGGTTGTTGCAGCGTTGAATTCATCATCTGTTTGCTCCTCACAATTCTAGGTTATATTCCTGGCATCATTTATGCTCTCTATGCCATTATCTTCGTTGATCGTGACCAGTACTTTGATGAATACAGGCGTCCTCTCTATTCGCAATACTGA 228 0.443 MPSRCEICCEIMIAILLPPIGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYSQY* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2395 75 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 73 IPR000612 GO:0016021
Vra7g2395 75 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016021
Vra7g2395 75 PANTHER BNAA03G50460D PROTEIN 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2395 Vra-Chr7 44106970 44107575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2395 1 72 RCI2 Gene Family AT4G28088 77.778 6.74e-40 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2395 - - gmx:100306426 159.073