Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2392 ATGCTGCAAAATGCCACTGTGGTCCCGTCCCATCCAAATTCTGGGACCAGAAAGTGCATTAGACAACAGACCAAAAAGGATGATGCAAGACCTGGATGCTCATCGGTAGCATACGGTGCATCAGAGGAAATTGGGCCATTCCGTGTAAACAAAACTGGATCTTCTCTATATCTCAACCCAGATGCATGGAACAAAGAAGCAAATATTCTTTTTCTTGAATCTCCTGCGGGTGTTGGCTTCTCATACACAAATACCAGCTCTGATCTCAAAACTTCAGGGGACAAAAGAACAGCTCAGGATGCACTGATTTTCCTAATCAGATGGATGTCAAGGTTTCCACAGTATAAATATAGGGAGTTTTACATTGCTGGGGAGAGCTATGCAGGGCACTACGTCCCCCAGTTGGCTAAGAAAATCCATGACTATAACAAAAAGAATCCCCAAATTATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAGCTACAATGATGGGATTGGAACCATCACATATTGGTGGAGTCATTCTATGATATCTGATCAGTCCTACAAATCCATCCTCAAGTACTGCAATTTCACTTCAGAAGAAACCTCTAAAAAATGTGATGATGCTTATAGTTATGCAGTTAACTATGAATTTGGAAAAATAGATCAGTACAGCATCTATACCCCAACGTGCCCAACATCACAGAACAATACTGTCAAACACATACGATTCAAGAATCTTCATATGATTTCAGGATATGATCCGTGTACTGAAAATTATGCAGAGAAATACTATAACCTTCCAGAAGTGCAGAAAGCAATGCATGCAAATGTTACCGACATTCCTTACAAATGGACTGCATGCAGTGAAGTGCTCCTAAAGAATTGGAAGGATTCTGAAATTTCTGTGCTGCCTATATACAAAGAGTTAACTGCTGCAGGATTGAAAATATGGGTATTCAGCGGGGACACAGATTCTGTGGTTCCAGTGACTGCCACGAGGTTTTCTCTGAACCACCTTAACCTAAGCATCAAAACTCGTTGGTATCCATGGTACTCTGGTGGACAGGTTGGTGGATGGACAGAGGTGTATAATGGTCTAACATTTGCAACAGTAAGAGGAGCTGGCCATGAAGTTCCTTTGTTTCAGCCAAAACGAGCTTACACCCTTTTTAAGTCCTTTTTGGCAGGAAAAGAACTACCAAAACATTGA 1206 0.4129 MLQNATVVPSHPNSGTRKCIRQQTKKDDARPGCSSVAYGASEEIGPFRVNKTGSSLYLNPDAWNKEANILFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALIFLIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIHDYNKKNPQIINLKGFIVGNAVTDSYNDGIGTITYWWSHSMISDQSYKSILKYCNFTSEETSKKCDDAYSYAVNYEFGKIDQYSIYTPTCPTSQNNTVKHIRFKNLHMISGYDPCTENYAEKYYNLPEVQKAMHANVTDIPYKWTACSEVLLKNWKDSEISVLPIYKELTAAGLKIWVFSGDTDSVVPVTATRFSLNHLNLSIKTRWYPWYSGGQVGGWTEVYNGLTFATVRGAGHEVPLFQPKRAYTLFKSFLAGKELPKH* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2392 401 MobiDBLite consensus disorder prediction 1 19 - -
Vra7g2392 401 ProSitePatterns Serine carboxypeptidases, histidine active site. 365 382 IPR033124 GO:0004185
Vra7g2392 401 PANTHER SERINE CARBOXYPEPTIDASE 24 30 400 - -
Vra7g2392 401 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 400 IPR001563 GO:0004185|GO:0006508
Vra7g2392 401 Gene3D - 301 395 - -
Vra7g2392 401 Gene3D alpha/beta hydrolase 28 231 IPR029058 -
Vra7g2392 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 59 71 IPR001563 GO:0004185|GO:0006508
Vra7g2392 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 72 82 IPR001563 GO:0004185|GO:0006508
Vra7g2392 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 133 IPR001563 GO:0004185|GO:0006508
Vra7g2392 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 365 378 IPR001563 GO:0004185|GO:0006508
Vra7g2392 401 MobiDBLite consensus disorder prediction 1 33 - -
Vra7g2392 401 SUPERFAMILY alpha/beta-Hydrolases 31 398 IPR029058 -
Vra7g2392 401 Gene3D - 254 291 - -
Vra7g2392 401 Pfam Serine carboxypeptidase 31 394 IPR001563 GO:0004185|GO:0006508
Vra7g2392 401 ProSitePatterns Serine carboxypeptidases, serine active site. 122 129 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2392 Vra-Chr7 44085769 44089257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2392 259 398 Calmodulin-binding Proteins AT2G22960 29.787 5.16e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2392 K16297 - gmx:100785391 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2392 7 44085769 44089257 Vra7g2392 7 44085769 44089257 ECH