Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2384 ATGGCTGAGCGCCGCAGCCCCCAAGCTCTCCCAGACCCGAACCTGGAACCAAACGATTCCGACCAAAAACCGCAAGACGCCAACCAGACACAACGACTCACCGAATCGCCCTCCGCTGCCGAGCCGCAGTGCGGCGAGTTACGAAGTTCCGGTGAGCGTCGCACGGAGTCCAATTTAGAAACCCTAGGCGGTGCCGGTACCTCTTCGGTGCAAACCCTTGCTGTGCATCACCATCGCAGTGACGATTTGCACGGGAGCTCTGCTGCGTCGAATTCCAGTGGCAAAGCCGAAAGTAAGGAGACAGATGCACCTCCTGAAAAAGAAATTATTCAAGGAGAAGCCCAGCCACTTCCAACTCAGACAAATCGACTTCAGCTGTCTGTTTGTTCAACTCCATTGTCTGAACTGCCACCAACATCTGTTATACAATCTTCACCATCTGTTTCTAGTCCATCTGTACCAAAACAAAAATTATCTACTCCAAAGGTCAATAATGCACGTTTGCCAGAAGTAGATAAGAAAAGTTCTTCTGGTGGCAAAACATTATCTGCTGTTTCTGTTGCAAGGTCATCTGCATCTGATGGATATAACTGGCGGAAGTATGGTCAGAAGCAAGTAAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACCCATTCAGACTGTTGTGCTAAGAAGATTGAATGTTGTGATCATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAATTCTCTTAGGGAAAATAAGATTCTGTCTGCCAGCGAACCAATTGTAGAAAAGAGTGTTCCAGACCAGCCTGTCAGACTTCTGAAAGGTCCTGATCCATCTATTTCCTCAAAAGAATCTCTACAAGAAGCACCTTGCAGCACTGATAAGAAACGGCCAAACTCGTCTAGTATCAGTAATGGTAAAGTTATTTTGAAAGAGGAACCTGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCCTGTAAAACCTGGAAAGAAGCCCAAGTTTGTTATACATGCAGCAGGGGATGTGGGGATATCGGGTGATGGTTATCGATGGCGGAAGTATGGGCAGAAAATGGTGAAGGGAAATCCGCATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTGAGAAAGCACATTGAATCTGCCGTAGATAACTCAGATGCCGTGATTATAACATACAAGGGAGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTAGTGGCAGCTGCAGCACCCGCCTCAATGAACAGTTTGCAGGTGAAGAAACCCGATTCCCCTCACAAGAAGAAAGTTTCTACTCAATGGTCGGTGGACACAGAAGGAGAACTAACTGGGGAAGCCCTTGAGCTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1512 0.4689 MAERRSPQALPDPNLEPNDSDQKPQDANQTQRLTESPSAAEPQCGELRSSGERRTESNLETLGGAGTSSVQTLAVHHHRSDDLHGSSAASNSSGKAESKETDAPPEKEIIQGEAQPLPTQTNRLQLSVCSTPLSELPPTSVIQSSPSVSSPSVPKQKLSTPKVNNARLPEVDKKSSSGGKTLSAVSVARSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVIEIVYKSEHSHDPPRKINSLRENKILSASEPIVEKSVPDQPVRLLKGPDPSISSKESLQEAPCSTDKKRPNSSSISNGKVILKEEPVNEPEPKKRMKKGDLTDMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPHKKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2384 503 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 1 501 - -
Vra7g2384 503 MobiDBLite consensus disorder prediction 321 349 - -
Vra7g2384 503 MobiDBLite consensus disorder prediction 114 163 - -
Vra7g2384 503 SUPERFAMILY WRKY DNA-binding domain 360 424 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 Gene3D WRKY domain 350 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 Gene3D WRKY domain 178 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 501 IPR044810 GO:0003700
Vra7g2384 503 Pfam WRKY DNA -binding domain 366 421 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 Pfam WRKY DNA -binding domain 194 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 ProSiteProfiles WRKY domain profile. 187 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 ProSiteProfiles WRKY domain profile. 359 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 MobiDBLite consensus disorder prediction 1 183 - -
Vra7g2384 503 MobiDBLite consensus disorder prediction 289 316 - -
Vra7g2384 503 SMART WRKY_cls 364 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2384 503 MobiDBLite consensus disorder prediction 13 38 - -
Vra7g2384 503 MobiDBLite consensus disorder prediction 268 351 - -
Vra7g2384 503 MobiDBLite consensus disorder prediction 56 74 - -
Vra7g2384 503 SUPERFAMILY WRKY DNA-binding domain 190 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2384 Vra-Chr7 44013315 44019330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2384 127 503 WRKY Transcription Factor Family AT4G30935 56.283 8.23e-135 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra7g2384 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2384 - - gmx:100127377 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2384 7 44013315 44019330 Vra7g2384 7 44013315 44019330 ECH