Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g2384 | ATGGCTGAGCGCCGCAGCCCCCAAGCTCTCCCAGACCCGAACCTGGAACCAAACGATTCCGACCAAAAACCGCAAGACGCCAACCAGACACAACGACTCACCGAATCGCCCTCCGCTGCCGAGCCGCAGTGCGGCGAGTTACGAAGTTCCGGTGAGCGTCGCACGGAGTCCAATTTAGAAACCCTAGGCGGTGCCGGTACCTCTTCGGTGCAAACCCTTGCTGTGCATCACCATCGCAGTGACGATTTGCACGGGAGCTCTGCTGCGTCGAATTCCAGTGGCAAAGCCGAAAGTAAGGAGACAGATGCACCTCCTGAAAAAGAAATTATTCAAGGAGAAGCCCAGCCACTTCCAACTCAGACAAATCGACTTCAGCTGTCTGTTTGTTCAACTCCATTGTCTGAACTGCCACCAACATCTGTTATACAATCTTCACCATCTGTTTCTAGTCCATCTGTACCAAAACAAAAATTATCTACTCCAAAGGTCAATAATGCACGTTTGCCAGAAGTAGATAAGAAAAGTTCTTCTGGTGGCAAAACATTATCTGCTGTTTCTGTTGCAAGGTCATCTGCATCTGATGGATATAACTGGCGGAAGTATGGTCAGAAGCAAGTAAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACCCATTCAGACTGTTGTGCTAAGAAGATTGAATGTTGTGATCATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCCCCACGGAAGATTAATTCTCTTAGGGAAAATAAGATTCTGTCTGCCAGCGAACCAATTGTAGAAAAGAGTGTTCCAGACCAGCCTGTCAGACTTCTGAAAGGTCCTGATCCATCTATTTCCTCAAAAGAATCTCTACAAGAAGCACCTTGCAGCACTGATAAGAAACGGCCAAACTCGTCTAGTATCAGTAATGGTAAAGTTATTTTGAAAGAGGAACCTGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCCTGTAAAACCTGGAAAGAAGCCCAAGTTTGTTATACATGCAGCAGGGGATGTGGGGATATCGGGTGATGGTTATCGATGGCGGAAGTATGGGCAGAAAATGGTGAAGGGAAATCCGCATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTGAGAAAGCACATTGAATCTGCCGTAGATAACTCAGATGCCGTGATTATAACATACAAGGGAGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTAGTGGCAGCTGCAGCACCCGCCTCAATGAACAGTTTGCAGGTGAAGAAACCCGATTCCCCTCACAAGAAGAAAGTTTCTACTCAATGGTCGGTGGACACAGAAGGAGAACTAACTGGGGAAGCCCTTGAGCTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA | 1512 | 0.4689 | MAERRSPQALPDPNLEPNDSDQKPQDANQTQRLTESPSAAEPQCGELRSSGERRTESNLETLGGAGTSSVQTLAVHHHRSDDLHGSSAASNSSGKAESKETDAPPEKEIIQGEAQPLPTQTNRLQLSVCSTPLSELPPTSVIQSSPSVSSPSVPKQKLSTPKVNNARLPEVDKKSSSGGKTLSAVSVARSSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVIEIVYKSEHSHDPPRKINSLRENKILSASEPIVEKSVPDQPVRLLKGPDPSISSKESLQEAPCSTDKKRPNSSSISNGKVILKEEPVNEPEPKKRMKKGDLTDMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPHKKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC* | 504 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g2384 | 503 | PANTHER | WRKY TRANSCRIPTION FACTOR 32-RELATED | 1 | 501 | - | - | |
Vra7g2384 | 503 | MobiDBLite | consensus disorder prediction | 321 | 349 | - | - | |
Vra7g2384 | 503 | MobiDBLite | consensus disorder prediction | 114 | 163 | - | - | |
Vra7g2384 | 503 | SUPERFAMILY | WRKY DNA-binding domain | 360 | 424 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | Gene3D | WRKY domain | 350 | 425 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | Gene3D | WRKY domain | 178 | 252 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 501 | IPR044810 | GO:0003700 | |
Vra7g2384 | 503 | Pfam | WRKY DNA -binding domain | 366 | 421 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | Pfam | WRKY DNA -binding domain | 194 | 248 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | ProSiteProfiles | WRKY domain profile. | 187 | 251 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | ProSiteProfiles | WRKY domain profile. | 359 | 424 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | MobiDBLite | consensus disorder prediction | 1 | 183 | - | - | |
Vra7g2384 | 503 | MobiDBLite | consensus disorder prediction | 289 | 316 | - | - | |
Vra7g2384 | 503 | SMART | WRKY_cls | 364 | 423 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | SMART | WRKY_cls | 192 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vra7g2384 | 503 | MobiDBLite | consensus disorder prediction | 13 | 38 | - | - | |
Vra7g2384 | 503 | MobiDBLite | consensus disorder prediction | 268 | 351 | - | - | |
Vra7g2384 | 503 | MobiDBLite | consensus disorder prediction | 56 | 74 | - | - | |
Vra7g2384 | 503 | SUPERFAMILY | WRKY DNA-binding domain | 190 | 251 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g2384 | Vra-Chr7 | 44013315 | 44019330 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g2384 | 127 | 503 | WRKY Transcription Factor Family | AT4G30935 | 56.283 | 8.23e-135 | 396 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vra7g2384 | WRKY | 2.3e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g2384 | - | - | gmx:100127377 | 764.607 |