Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g2382 | ATGGGGTTGGGAGTGTTTGGTTCTGTTCTGGTTTTGGTACTTTTGTTCAAGCATTTGGAATCTCAGCAACCAAATACTGATGAGTTTTTTGTTTCTGCGTTCTTGAAGCATATGAGTTTAACATCTTCACAAGCCTACAATTTCTCTGCTTCTGTCTGCTCATGGCAAGGGGTTTCTTGTGATGCCAATAGAGAACATGTTGTTGGCTTAGTCTTTTCTGGTATGAACCTCTCTGGCACTGTACCTGATAACACCATAGGCAAGCTAGGCAAACTTCAAACTCTAGATCTTAGCCACAACAAAATTACTGGCTTGCCATCAGATTTTTGGAGCTTAAGCTCCCTCACGAACCTTAATCTCTCCTCGAATCATATTTCTGGTTCACTGACTAGCAACATTGGCAACTTTGGTTTGCTAGAAAGCATTGACTTGTCCAGCAACAATTTCTCTGAGGAAATTCCTGAAACTGTTTGTTCACTGCTGAATCTAAGGGTCCTCAAACTCAACCACAACAGGTTTGCACACAACATACCTTACGGGATTCTCAAGTGCCAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTCAATGGAACACTTCCAGAGGGTTTTGGTGCTTCTTTTCCCAAGCTTAGGATATTGAACCTTGCTGGGAATAATTTTAATGGTCGTATTTCAGATATTTCTGGGTTAAAGTCCATTGCTAATCTCAACATATCAGGGAATTCGTTTCAGGGTTCCGTTGTGGACATGTTTCAGGGAAGGTTGGAGGTTCTGGACATTAGCAAAAACCAATTTCAAGGCCACATTCCACAGGTACTATACAACTTTAGTGGTTACAACTGGTCTCATTTAGTATACCTAGATTTGTCAGAGAACAAGCTTAGTGGGGAGTTTTTTCAAAATTTGAACGAGTCCTTGAATTTAAAACACATTAATCTTGCACACAATAGATTTACCATACAGAAATTTCCCCAAATTGAAATGCTCCTGAAGTTGGAATATCTGAACTTGTCCAAAACCAGCCTTGTCAGTGAAATTCCTGGTAAAATCTCACAATTAAGAAAATTGAGTGCACTTGATCTTTCTTTGAATCATCTGAGTGGGAAAATTCCCTCACTGAGGAATGAACACCTCCGAGTCTTAGACCTCTCAAACAACAATTTGACAGGAGCAGTCCCTCAATCTGTCTTGGAGAAACTCCCAGGGATGGAGAAATACAACTTCTCTTATAATAACCTAACCCTTTGTGCTTCTGAAATCAGACCTGAGATCCTGCAAACAGCATTCTTTGGATCATTGAACAGTTGTCCAATTGCTGCGAATCCGCGACTCTTCAAAAGAAGAGACACTGGACACACAGGAATGAAGCTCGCCCTGGCACTGACCTTCTCAATGATCTTTGTGCTGGCTGGGCTTTTGTTTCTAGCATTTGGTTGCAGAAGGAAAACAAAAATGTGGGAATTCAAGCAATCTTCATACAAAGAAGAACAAAACATTTCAGGTCCCTTTTCATTCCAGACTGATTCAACAACTTGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCCAGTAGTAATCTTTGAGAAGCCGTTGTTGAACATCACATTTGCAGACCTCTTGGCTGCAACTTCCAACTTTGACAGAGGCACCCTTTTGGCTGAGGGAAAATTTGGGCCAGTCTATAGAGGATTTCTGCCTGGTGGTATTCACGTGGCAGTAAAAGTTTTGGTTGTTGGTTCTACATTAACAGATGAGGAAGCTGCAAGAGAGCTAGAGTTTCTTGGTAGAATCAAGCACCCCAATCTTGTTCCTTTAACTGGATACTGTGTGGCTGGGGACCAAAGAATTGCCATATACGATTACATGGAGAATGGTAACTTGCAAAACCTGCTTTACGACCTGCCACTTGGGGTACAAAGCACAGATGACTGGAGCACAGACACATGGGAAGAAACAGACAACAATGGAATTCAAAATGCTGGTTCTGAAGGGTTACTGACATCTTGGAGATTTCGCCACAAGATAGCCCTTGGCACGGCTCGAGCGTTGGCATTTCTGCATCACGGTTGCTCCCCTCCAATAATTCACAGAGCAGTTAAGGCTAGCAGTGTTTATTTGGATTATGACTTGGAGCCGAGGTTGTCTGATTTTGGACTGGCCAAGATTTTTGGAAGTGGCTTGGATGATGAAATTGCGCGTGGCTCACCTGGTTATGTTCCACCGGAGTTTTCTCAACCAGAATACGACACCCCAACTCCGAAATCTGATGTGTACTGTTTTGGGGTGGTGCTGTTTGAGCTAGTAACTGGAAAAAAGCCAGTTGGAGATGACTACCCTGATGATAAAGATGCAACTTTGGCGAGTTGGGTGAGAGGACTTGTGAGAAAGAACCAATCTTCAAATGCTATTGATCCAAAAATTCGTGACACAGGACCTGATGAACAAATGGAAGAGGCCCTTAAGATTGCTTATCTTTGCACTGCTGACAGTCCCTTCAAACGACCAAGCATGCAACAGATAGTTGGACTTCTGAAGGATATCGAACCTACTGCTGATTAG | 2565 | 0.425 | MGLGVFGSVLVLVLLFKHLESQQPNTDEFFVSAFLKHMSLTSSQAYNFSASVCSWQGVSCDANREHVVGLVFSGMNLSGTVPDNTIGKLGKLQTLDLSHNKITGLPSDFWSLSSLTNLNLSSNHISGSLTSNIGNFGLLESIDLSSNNFSEEIPETVCSLLNLRVLKLNHNRFAHNIPYGILKCQSLVSIDLSSNQLNGTLPEGFGASFPKLRILNLAGNNFNGRISDISGLKSIANLNISGNSFQGSVVDMFQGRLEVLDISKNQFQGHIPQVLYNFSGYNWSHLVYLDLSENKLSGEFFQNLNESLNLKHINLAHNRFTIQKFPQIEMLLKLEYLNLSKTSLVSEIPGKISQLRKLSALDLSLNHLSGKIPSLRNEHLRVLDLSNNNLTGAVPQSVLEKLPGMEKYNFSYNNLTLCASEIRPEILQTAFFGSLNSCPIAANPRLFKRRDTGHTGMKLALALTFSMIFVLAGLLFLAFGCRRKTKMWEFKQSSYKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWEETDNNGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDDEIARGSPGYVPPEFSQPEYDTPTPKSDVYCFGVVLFELVTGKKPVGDDYPDDKDATLASWVRGLVRKNQSSNAIDPKIRDTGPDEQMEEALKIAYLCTADSPFKRPSMQQIVGLLKDIEPTAD* | 855 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g2382 | 854 | Pfam | Leucine rich repeat | 80 | 125 | IPR001611 | GO:0005515 | |
Vra7g2382 | 854 | SUPERFAMILY | L domain-like | 46 | 418 | - | - | |
Vra7g2382 | 854 | SUPERFAMILY | Protein kinase-like (PK-like) | 534 | 846 | IPR011009 | - | |
Vra7g2382 | 854 | PANTHER | CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 851 | - | - | |
Vra7g2382 | 854 | Gene3D | Transferase(Phosphotransferase) domain 1 | 624 | 853 | - | - | |
Vra7g2382 | 854 | ProSiteProfiles | Leucine-rich repeat profile. | 91 | 112 | IPR001611 | GO:0005515 | |
Vra7g2382 | 854 | Gene3D | Ribonuclease Inhibitor | 30 | 177 | IPR032675 | - | |
Vra7g2382 | 854 | Gene3D | Phosphorylase Kinase; domain 1 | 508 | 623 | - | - | |
Vra7g2382 | 854 | PRINTS | Leucine-rich repeat signature | 92 | 105 | - | - | |
Vra7g2382 | 854 | PRINTS | Leucine-rich repeat signature | 355 | 368 | - | - | |
Vra7g2382 | 854 | Pfam | Leucine Rich repeat | 377 | 392 | IPR001611 | GO:0005515 | |
Vra7g2382 | 854 | ProSiteProfiles | Protein kinase domain profile. | 548 | 853 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra7g2382 | 854 | Pfam | Protein tyrosine and serine/threonine kinase | 552 | 844 | IPR001245 | GO:0004672|GO:0006468 | |
Vra7g2382 | 854 | ProSiteProfiles | Leucine-rich repeat profile. | 379 | 400 | IPR001611 | GO:0005515 | |
Vra7g2382 | 854 | SMART | LRR_typ_2 | 378 | 401 | IPR003591 | - | |
Vra7g2382 | 854 | SMART | LRR_typ_2 | 331 | 355 | IPR003591 | - | |
Vra7g2382 | 854 | SMART | LRR_typ_2 | 112 | 136 | IPR003591 | - | |
Vra7g2382 | 854 | SMART | LRR_typ_2 | 160 | 184 | IPR003591 | - | |
Vra7g2382 | 854 | SMART | LRR_typ_2 | 185 | 208 | IPR003591 | - | |
Vra7g2382 | 854 | SMART | LRR_typ_2 | 89 | 111 | IPR003591 | - | |
Vra7g2382 | 854 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 1 | 851 | - | - | |
Vra7g2382 | 854 | Gene3D | Ribonuclease Inhibitor | 280 | 440 | IPR032675 | - | |
Vra7g2382 | 854 | Gene3D | Ribonuclease Inhibitor | 178 | 279 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g2382 | Vra-Chr7 | 43993771 | 43997379 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g2382 | 70 | 849 | Receptor kinase-like Gene Family | AT5G07280 | 32.378 | 2.38e-113 | 372 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-2 | Vra7g2382 | PK_Tyr_Ser-Thr | 2.9e-31 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g2382 | - | - | gmx:100797738 | 1521.91 |