Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2363 ATGCACCGAAGAGCCCCATTCCCTCGTCTCCTTCTCGATAATGTCGCATGTATGAGAAATGCACAGCAAGTTCTGCGTCATGTGAATGTGTCTCTTCATGATGGAGGGGCGCTTGTGCTAACAGGCGCAAATGGCTCGGGGAAGACAACTTTCCTGCGTATGTTAGCTGGGTTTTCTCGTCCTTCTGCTGGCCAAATCCTTTGGAATGGCCATGACATACAACAATCTGCAATATACCATCAATATAAGCTTCAACTTAACTGGCTCTCTCTCAAGGACGCCATTAATGATAAGTTCACAGTTCTCAACAATGTACAATGGTTTGAAGTTCTTGAGTACAAGGAAGGGAAGGCTTTGGCTGCTGTGGAGTTGATGGGACTAGGAAGATTAGCTAATGAAAAACCAAGGATGCTTTCTATGGGCCAGCGTAAAAGACTACAACTTGCCAGGTTGCTCGCAATTGATCGACCCATATGGTTGCTAGACGAGCCTTCGGTTGCATTAGACGATGAAGGAGTAAAGTTGCTTGAGTATATCATTGCAGAACATAGGAAACACGGAGGAATTGTGATAGTGGCGACTCATCTACCCATTGAGATAGAAGATTCCATGGTTTTGAAACTTCCACCAAGGTTTCCCAGGAGGATGACCCATGCGGATATGCTTGATCGGGCGGATATCAGTTAA 687 0.4556 MHRRAPFPRLLLDNVACMRNAQQVLRHVNVSLHDGGALVLTGANGSGKTTFLRMLAGFSRPSAGQILWNGHDIQQSAIYHQYKLQLNWLSLKDAINDKFTVLNNVQWFEVLEYKEGKALAAVELMGLGRLANEKPRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKHGGIVIVATHLPIEIEDSMVLKLPPRFPRRMTHADMLDRADIS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2363 228 Gene3D - 6 224 IPR027417 -
Vra7g2363 228 Pfam ABC transporter 25 165 IPR003439 GO:0005524
Vra7g2363 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 199 IPR027417 -
Vra7g2363 228 SMART AAA_5 34 222 IPR003593 -
Vra7g2363 228 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 12 208 IPR005895 GO:0017004|GO:0022857
Vra7g2363 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 8 222 IPR005895 GO:0017004|GO:0022857
Vra7g2363 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 227 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2363 Vra-Chr7 43783976 43785698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2363 23 208 Calmodulin-binding Proteins AT2G36910 25.248 2.89e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2363 - - gmx:100796586 408.683