Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2360 ATGGTGGAAGAAGACCATTTTCCTGTGGGTTTGCGTGTACTTGCGGTTGATGACGACAGAACTTATCTCACAGTGTTGGAGAATCTGCTTCGCAAATGCCAGTATAATGTTACTGCAACTACTCAATCAGTGAAGGCGCTAGAAATGCTGAGGAAAAACAGAAACGAGTTTGACCTTGTTATCAGTGATGTGAATATGCCAGAAATGGATGGGTTTAAGCTGCTTCAGCAAGTGGGACTTGAGACGGACCTACCCGTTATCATGTTGTCAGGGTACGGTGATAGAGAACGGGTGATGAAAGGTGTTATATATGGTGCTTGTGACTTTTTAACCAAACCAGTTCGAATTCAAGAGTTACAGAACATATGGCAACATGTAGTGCGGAGGAAGATTGACAGCAAGGATAAGAATAAGACTGCAAGTGAGGAAAAAGACTGCAGTATAGCATGTAAGTTTGCAAATGAGGAGGAACCGTGCACTGTTGCTGGGGAATGTAGTCAAGCCTTGGCACCAAAAACTAATGCTGACCAGAATATAAAAGTGGATCATAAAAGGAAAGAACGCTGTGAGGTTGAGGAAATGGAAGAAGATGACAAAGAGAACGATGAACCCTCCAATCAGAAGAAATCTCGTTTAGTTTGGGATACTGAGTTGCACAACAAATTTCTCGCTGCCATTAATCAGCTGGAAATTGACAAAGCCTTCCCCAAGAAAATACTTGACTTGATGAATATTGATGGACTTTCAAGAGAAAACGTAGCAAGCCATCTCCAGAAATTCAGACTCGGTCTCAAAAAGCCCAATCCTTACCACCGTATGGGTTCAGTTGATTGCTTTCGCACTTCATCTGAATCAGGAGCTATGTTGAGCACCACATTACCTTCATATGCATATGCACCTGGTGGAAGGTTTAGTGTGTTAAACTCTCCATCCTGCTTGAACACTCGAGGAATGAACTCATCTGCAATTGTTCAGGCTTCTCAGTCTCGAAACATTAACAGCAGCTCCATAAAAACACATGGAAACATGCACTCGTCTATGTTTTCTGCAAATCAAACCTCAAGCTTATTGCAGGGCATTCCAACATCAATGGAGGCTAACCATTTTAAGCCCAACAACTCAGCAGCTGGTATTAGGAGGTTTAATCCACTTGATCATTCAGCTGCACTTAAAGATTTCTCTAGTTTCTCGGAAAATATAGCCACTGTTAGAAATGCAGCTAATATATCTCTTCCTGGTCTCTCCAATAATCATTTACTTTTTCAAGGAATTTCCCAACTTAAACATCATTCTGAAGCATTCAGAAATCATTCATCTTTTGGAGCTGCTGCTGTGAAAACACAATCTTTTTATCCAAACTCCTGTGGTTATTCTAAAATGGGGGATGATTATAATAATAAAAGGTGGCAGGAAGCTGCTCCGATATCTACCTGTCCTTCAAATACTTCTGCTGTCAGTAACGTTTTCAATAATGATCAACTACTTCAGCATAACTTTAAGTTGTCCTCATCCAATTTTTGCAGTAGGAACAGTCCAGTTGGTTTTTCTTCCAGTGTTCCTTTGGAGGATGATGTCCTAGGTGAGATGCTGCACCAAGAAGGCTTACTTGGGAATATCTTACTAGCTTCGTGTTACACCAAGAATAACCAAGGAGGTTGCAGCAAAGACACAAGTCAAACCTTCAATTCCATAAATCCTGTCATTTCTCCTAATGGAGGCACCAGTCCCTTGGGACATAGCTATGAACAAAATAGTACAGTTGACAATAACAGAATTGATGCATCTTTGGTTGGCCAAATGAATGGGGTAAATCCATCAATCACAATGTGTAGTGAAGGTGAGAATTTCTATTCAATGAAGTCAAATGATGCGTATGTTTTGCAGAGCATGAAGTCCGGTGAAGGACTCATGCAGAATAGTTTGGAGTCCCTGGATGACATATTGAATGGAATAGACGAACAGGATCTAAATGCGATTATGTTGATGAATGAAGAGCTATAG 2001 0.4083 MVEEDHFPVGLRVLAVDDDRTYLTVLENLLRKCQYNVTATTQSVKALEMLRKNRNEFDLVISDVNMPEMDGFKLLQQVGLETDLPVIMLSGYGDRERVMKGVIYGACDFLTKPVRIQELQNIWQHVVRRKIDSKDKNKTASEEKDCSIACKFANEEEPCTVAGECSQALAPKTNADQNIKVDHKRKERCEVEEMEEDDKENDEPSNQKKSRLVWDTELHNKFLAAINQLEIDKAFPKKILDLMNIDGLSRENVASHLQKFRLGLKKPNPYHRMGSVDCFRTSSESGAMLSTTLPSYAYAPGGRFSVLNSPSCLNTRGMNSSAIVQASQSRNINSSSIKTHGNMHSSMFSANQTSSLLQGIPTSMEANHFKPNNSAAGIRRFNPLDHSAALKDFSSFSENIATVRNAANISLPGLSNNHLLFQGISQLKHHSEAFRNHSSFGAAAVKTQSFYPNSCGYSKMGDDYNNKRWQEAAPISTCPSNTSAVSNVFNNDQLLQHNFKLSSSNFCSRNSPVGFSSSVPLEDDVLGEMLHQEGLLGNILLASCYTKNNQGGCSKDTSQTFNSINPVISPNGGTSPLGHSYEQNSTVDNNRIDASLVGQMNGVNPSITMCSEGENFYSMKSNDAYVLQSMKSGEGLMQNSLESLDDILNGIDEQDLNAIMLMNEEL* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2360 666 SMART REC_2 11 123 IPR001789 GO:0000160
Vra7g2360 666 Gene3D - 11 147 - -
Vra7g2360 666 SUPERFAMILY Homeodomain-like 207 266 IPR009057 -
Vra7g2360 666 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 262 IPR006447 GO:0003677
Vra7g2360 666 PIRSF RR_ARR_type-B 1 665 IPR017053 GO:0003677|GO:0003700|GO:0009736
Vra7g2360 666 CDD REC_typeB_ARR-like 13 127 - -
Vra7g2360 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 655 IPR045279 GO:0009736
Vra7g2360 666 SUPERFAMILY CheY-like 10 133 IPR011006 -
Vra7g2360 666 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
Vra7g2360 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 655 - -
Vra7g2360 666 Gene3D - 205 266 - -
Vra7g2360 666 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2360 Vra-Chr7 43766753 43770208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2360 5 373 Response Regulator Gene Family AT2G25180 44.444 3.15e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g2360 Response_reg 2.8e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2360 - K14491 vun:114177568 1188.71