Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2351 ATGAAGCCACAGAAACTCACCGACTATGAGCTCCAGCGACTCCAGAACATTCGCCGCAACGATGAGATGATGGCAGCGCTCAAACTCCATTCCAAAGCCACCCAACTCTCCAATTTCAAGCGTCAAAGAGTTGAAGCCAAATCCACACGCGTGAAATCGGAAAAGAAACCTAAAACCGAAACCCCAATTGTCATCAGAGTCAGACGCTCCCTGCGAACCAGAGGTATTCCACCAGATTGTGAGGGTCTTGACAGAGATTCCGTGGCCCCCACCACTCCCTCCAAAGAAAAACCACTTTCCGTCGTAAGTTTGGGTCCCCTTTCCATGGCCACTGCTCGTGAAAGCGCTCACTCTGATAGTTCATTCATTGAGTCGCTAATGGGTATGGCCCAAGATGTCAGTGTTCCAAAAGGGAATGCGGGGGATTCCCTTGAATTGGAATCTCTGTCTTTGGATTCCGACAATATTGCGCGGGTTGTTTCTGGAAGGATTACCAATGTCAGGTTTTTCCCTACCAGCAGTGTCAAAATGATTGCCGCGGGTAACAAGTTTGGGAATATTGGGTTCTGGAATATGGGAGAAAATGAGGTTCATTTATACCGTCCTCATAATGCTCCCATTTCTGGGATTTTGATTCAACCACATTGTATTTCCAAGATATACACAAGTTGCTATGATGGAGTTCTTCGGCTAATGGATGCTGAGAAGGAAATCTTTGATCTGGTGTTTGAGAGTGATGAAACAATATATGCTCTTTCTCAACCACCAAATGAGACAAACTGCGTATATCTTGCCGAGGGTTCTGGAGGTTTGACTATGTGGGATAACAGGGCGGGAAAACGGTCGTCGCACTGGGATTTGCATGACTGGAGGATTAACACGATAGATTTCAACTGTCAAAACCCTCACATTGTAGCTACTAGTTCCTCTGATGCAACTGCCTGCACCTGGGATTTGAGATGTACTAATAGGAATGACCTCAAAGCCTTGAGGACATTTACCCACAAAAGATCTGTCCAATCTGCTTACTTCTCTCCTTCTGGAGGTAGCCTCGCAACTACAAGCTTGGACAACACTATTGGAATTTACAGTGGAGTTAACTTGGAGGATACGGCTGTTATTTCTCATTTCAATCAGACTGGCAGATGGCTTTCTACATTCAGAGCGAAATGGGGTTGGGATGACAAATATCTCTTCATTGGAAATATGAACAGAGGGGTTGATGTGGTTTCAGCAGTTCAAAGGAAAATAGTTATGACGTTAGAAAGCCCACACATGTCTGCCATTCCTTGCAGATTCGATATAAACTCTTACGAGGTTGGGATGCTTGTAGGAGCTACAAGTGGAGGCCAGCTTTACGTCTGGACATCACGCTAG 1377 0.4553 MKPQKLTDYELQRLQNIRRNDEMMAALKLHSKATQLSNFKRQRVEAKSTRVKSEKKPKTETPIVIRVRRSLRTRGIPPDCEGLDRDSVAPTTPSKEKPLSVVSLGPLSMATARESAHSDSSFIESLMGMAQDVSVPKGNAGDSLELESLSLDSDNIARVVSGRITNVRFFPTSSVKMIAAGNKFGNIGFWNMGENEVHLYRPHNAPISGILIQPHCISKIYTSCYDGVLRLMDAEKEIFDLVFESDETIYALSQPPNETNCVYLAEGSGGLTMWDNRAGKRSSHWDLHDWRINTIDFNCQNPHIVATSSSDATACTWDLRCTNRNDLKALRTFTHKRSVQSAYFSPSGGSLATTSLDNTIGIYSGVNLEDTAVISHFNQTGRWLSTFRAKWGWDDKYLFIGNMNRGVDVVSAVQRKIVMTLESPHMSAIPCRFDINSYEVGMLVGATSGGQLYVWTSR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2351 458 PANTHER UNCHARACTERIZED 1 457 - -
Vra7g2351 458 SUPERFAMILY WD40 repeat-like 160 455 IPR036322 GO:0005515
Vra7g2351 458 Gene3D - 155 458 IPR015943 GO:0005515
Vra7g2351 458 MobiDBLite consensus disorder prediction 69 99 - -
Vra7g2351 458 MobiDBLite consensus disorder prediction 43 59 - -
Vra7g2351 458 SMART WD40_4 278 318 IPR001680 GO:0005515
Vra7g2351 458 SMART WD40_4 326 364 IPR001680 GO:0005515
Vra7g2351 458 SMART WD40_4 193 233 IPR001680 GO:0005515
Vra7g2351 458 PANTHER WD REPEAT-CONTAINING PROTEIN 76 1 457 IPR033052 GO:0006974
Vra7g2351 458 MobiDBLite consensus disorder prediction 40 59 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2351 161 409 U-box Gene Family AT1G04510 22.053 3.61e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2351 K24755 - gmx:100800122 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2351 7 43636455 43639222 Vra7g2351 7 43636455 43639222 ECH