Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2327 ATGTTGAGAGTGAAGGGAGGGAAAAGGCCACCTTGGGTGGGACTTGGAGCTGCCGTCTGGGTTCAGATTTGTTCAGGAAATGGCTTCACTTTCCCTCTCTACTCTCATTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAGATTACTCTGCTTGGTGTTGCCAATGATATTGGTGAGAACGTTGGCATTCTTCCTGGTCTCGCCTGCAACAAGTTCCCCCCTTGGCTCATTCTTCTTATTGGTGGTCTCTTATCATTCCTTGGTTTTGGTGTTCTCTGGCTTGCTATTTCCAAAACATTTGATTGCGTTCCTTTCATTGTGCTATGGCTTGCACTTGTTGTAGCTACCAACAGCTGTGCATGGTTATCTACTGCTATTCTAGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCAGGAGTCCTCAAAGGTTATTCGGGGCTCAGTGCTGCAGTTTTTACGGAAATTTACAGTGTGGGTTTTCATAATTCTTCACCCAACTTCCTGTTGTTCCTTGCCATTGGTATTCCTGCTTTATGCTTCAGTACCATGTTTCTTGTTCGGCCTTGCACTCCGGCTTCCGGTGAAGATTCTTCTGAAAACGGTCATTTTCTGTTCGTCCAAGGTGCTAGTGTAGCCTTGGGTTTATACTTACTTGCAACAACAATACTTGACAACTTTGTCCCCATGAGTCATACAGTATCATTTGTTATTTTGGCTGTGATGATTCTCCTTCTCTTGGCTCCCCTTGCAATCCCTATAAAGATGACACTGTGCCCCAGAAAAGCATCTGCATCAGAAACACCAGAGCAACATGTTGGATCTTCCGACTTTCTGGTTCAAGATGGCAAGGTGGACAACACAGAACCCTTGCTATCATCTTCATCAACCAGTGGCCTTGGAAGTTTTAATGATGTGGATGGTTCAGCTGAGGTGGCCATGCTTCTCGCTGAGGGTGAGGGGGCAGTGAGGAAGAAGAGAAGGCCCAAGAGAGGGGAAGATTTTAAGTTTACCGAGGCTCTCGTTAAGGCAGATTTCTGGCTACTGTTTTTTGTTTATTTTGTTGGGGTTGGAACAGGGGTTACTGTTCTGAATAATTTGGCTCAGATTGGCATTGCACAAGGTATGGAAGATACCACTGTTTTGCTGTCATTATTCAGCTTTTTCAATTTTGTGGGTCGGCTAGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATTTTCTTGTACCTTCTCTTTGCATATGCTATCAAGGGAACACTTTATCCTGCAATTGCAGTTCTTGGCATCTGCTATGGCGTGCAATTTTCCATAGTGATTCCGACTGTTTCAGAGCTTTTTGGGTTGAAACACTTTGGTTTGTTGAGCAACTTCATGGGTCTGGGGAATCCACTTGGCGCATCACTTTTTTCGGCTCTTCTAGCAGGACACGTATATGATAACGAGGCAGCAAAACAACATGGCCAAGGCCTCATTGCTTCAGGTGTTACATGTATTGGTCCAAGTTGTTTTCAGCTAACTTTTTTCACTCTGGCTGGTGTGTGTGTTGCGGGTACTCTCACCAGCATTATCTTGACTATAAGAATTAAGCCCGTTTACCAAATGCTTTACTCTGGGGGTTCGTTTAAGCTACCTCAAACTTCAGGCCACTAA 1716 0.4452 MLRVKGGKRPPWVGLGAAVWVQICSGNGFTFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILLIGGLLSFLGFGVLWLAISKTFDCVPFIVLWLALVVATNSCAWLSTAILVTNMRNFPVSRGTVAGVLKGYSGLSAAVFTEIYSVGFHNSSPNFLLFLAIGIPALCFSTMFLVRPCTPASGEDSSENGHFLFVQGASVALGLYLLATTILDNFVPMSHTVSFVILAVMILLLLAPLAIPIKMTLCPRKASASETPEQHVGSSDFLVQDGKVDNTEPLLSSSSTSGLGSFNDVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTVLLSLFSFFNFVGRLGGGVVSEHFVRTKTIPRTIWMTCTQIIMIFLYLLFAYAIKGTLYPAIAVLGICYGVQFSIVIPTVSELFGLKHFGLLSNFMGLGNPLGASLFSALLAGHVYDNEAAKQHGQGLIASGVTCIGPSCFQLTFFTLAGVCVAGTLTSIILTIRIKPVYQMLYSGGSFKLPQTSGH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2327 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Vra7g2327 571 CDD MFS_Mch1p_like 10 540 - -
Vra7g2327 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 569 - -
Vra7g2327 571 Pfam Nodulin-like 11 258 IPR010658 -
Vra7g2327 571 Gene3D MFS general substrate transporter like domains 347 554 IPR036259 -
Vra7g2327 571 SUPERFAMILY MFS general substrate transporter 213 552 IPR036259 -
Vra7g2327 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2327 Vra-Chr7 43334916 43338524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2327 2 571 Nodulin-like Gene Family AT1G80530 57.168 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2327 - - gmx:100787328 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2327 7 43334916 43338524 Vra7g2327 7 43334916 43338524 ECH
Vra7g2327 7 43334916 43338524 Vra5g0424 5 4433205 4435967 PCT