Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2310 ATGGGAGCAGCGATTCTCCCAGATCTCGGAACCGAGATTCTCATTCCCGTCTGCGCGGTCATTGGAATCGCCTTCGCCCTCTTCCAGTGGCTCCTCGTCTCCAAGGTCAAACTCTCTGCCGTCAGAGACGCTTCTCCCAACGCCGCCGCCAAGAATGGCTACAACGACTACCTCATCGAAGAAGAGGAGGGCATCAACGACCACAACGTCGTCGTCAAATGCGCCGAAATACAGAACGCCATTTCCGAAGGAGCAACCTCTTTCCTTTTTACTGAATACAAGTATGTAGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTTTTCCTTGGTTCAGTAGAGGGATTCAGCACAAGCCCCCAGGCTTGCTCATACGATAAAACTAAAACNTGTAAGCCANCACTTGCAACGGCTATTTTCAGCACCGTATCTTTCCTGCTTGGTGGGGTCACATCACTTGTTTCTGGATTCCTTGGAATGAAAATTGCAACTTACGCCAATGCAAGAACCACCCTGGAGGCAAGAAAGGGTGTTGGGAAGGCCTTCATTACGGCTTTTAGATCTGGTGCTGTTATGGGTTTTCTCCTAGCCGCAAATGGTCTTCTGGTTCTTTACATTGCCATCAACTTGTTTAAGATCTATTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATAACTGGTTATGGTCTCGGTGGGTCTTCTATGGCTTTGTTCGGAAGAGTTGGCGGAGGTATTTATACCAAGGCTGCTGATGTTGGTGCTGATCTCGTTGGCAAGGTTGAGAGAAACATTCCCGAAGATGATCCAAGAAATCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTCGGAGATATAGCTGGTATGGGATCTGATCTGTTTGGTTCATATGCGGAGTCATCTTGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCATTTGGGTTGAATCACGAGTTGACTGCGATGCTCTACCCTCTCATTGTCAGTTCTGTGGGTATTCTTGTTTGTTTGCTCACCACCTTATTTGCAACTGACTTCTTTGAGATCAAGGCTGTGAAAGAGATTGAGCCTGCATTGAAAAAACAGCTCGTTATTTCCACTGTGCTGATGACTATTGGGGTTGCAGTTGTTAGTTTTGTTGCACTTCCAACTTCCTTCACTATCTTCAATTTTGGAGTGCAGAAAGACGTCAAGAGCTGGCAGCTATTTTTGTGTGTTGCTGTTGGTCTTTGGGCANGACTTATTATCGGATTTGTAACTGAGTACTATACTAGTAACGCATATAGTCCTGTTCAAGATGTTGCTGACTCCTGCAGAACTGGTGCTGCAACTAATGTTATATTTGGCCTTGCCTTAGGATACAAGTCTGTTATCATTCCAATTTTTGCTATAGCAATTAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCCGTTGCTGCACTTGGGATGCTTAGTACCATTGCTACNNGGTTGGCCATAGACGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGCATGAGTCACAGAATTCGTGAGAGAACTGATGCCCTTGATGCTGCTGGTAACACTACAGCTGCAATTGGGAAGGGCTTTGCCATTGGTTCTGCCGCCCTCGTATCTCTGGCCCTTTTTGGTGCCTTTGTGAGCCGAGCATCTATTACAACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTAATTGTGGGAGCAATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATCCCAGGGTTGATGGAGGGAACTGCCAAGCCTGACTATGCTACATGTGTTAAGATCTCTACTGATGCTTCCATTAAAGAAATGATTCCACCTGGTGCTCTTGTCATGCTTACACCTCTTGTTGTTGGGATCCTTTTTGGTNTCGAAACACTTTCTGGTGTCCTCGCTGGATCTTTGGTATCTGGTGTACAGATTGCCATCTCTGCATCCAACACCGGCGGTGCATGGGATAATGCAAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCCAGAAGCCTTGGTCCAAAAGGGTCAGATTGCCACAAGGCAGCAGTTATTGGTGACACCATTGGAGACCCTCTCAAGGATACATCTGGTCCCTCACTTAACATCCTTATCAAGCTGATGGCAGTTGAGTCTCTTGTTTTTGCCCCCTTCTTTGCTACCCATGGTGGTTTACTCTTCAAGATCTTCTAA 2301 0.4607 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPXLATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAXLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATXLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGXETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2310 766 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vra7g2310 766 Pfam Inorganic H+ pyrophosphatase 23 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vra7g2310 766 PIRSF H+-PPtase 12 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vra7g2310 766 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vra7g2310 766 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vra7g2310 766 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2310 Vra-Chr7 43216892 43221313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2310 4 629 Primary Pumps ATPases AT1G15690 86.645 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2310 K23025 - gmx:100775864 1422.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2310 7 43216892 43221313 Vra7g2310 7 43216892 43221313 ECH