Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2252 ATGGACATCGTTGCCGTGATAATAACTTGCCTGTTGCTCATGTCTGTGGCTGTGGGGACAAGAGTTGAAACGCATCAGATACCACTCGGAACCATACTTGCTGCACAGAGTACTACTACTCCTTCTTTCTGGCTTTCTCCTTCTGCTCAATTTGCATTTGGTTTTTATCCACTAGAACAAGGTGGTGACTTTGTCGTTGCAATTTGGCTGGTTAGCGGGGAGAACAAGACAGTGGTATGGACTGCGCAACGGAATGATCCTCCGGTAACCTCAGGTGCAAAGCTACAACTAAACATGGACGGTAAACTCGTACTAACAGACGACCAACGAGAAGAGAAGGTTATTGCAGCTAATTTCAGTGCAAAAGCTGCCTCTGCCTCCGTGCTCGATTCTGGAAACTTTGTGCTCTACAACAGTAAAAACGACATCATATGGCAGAGTTTCGATTACCCAACAGATACTTTGTTAGGTGGTCAATCTCTTCCAAACGGACATCAACTGGTGTGCAATTCATCACAGAACAACCATTCCAGTGGACGCTTTCGTCTCAAGATGCAGGATGACGGAAATCTTGTTCTGTATCCAGTGGACACAACTGACACAGGAACGGATGCTTACTGGGCCTCTGATACTAGTTTTGCTTTGAATCGCCGTGACCAATATCAGTACCCTCTCGACGAAAATGGTACTCTGCGGATTCTGAATGAAAGCAGTCATGGGAGGACTAAGGTGATTCTAAGTGTAATCAGTAATTCATCTTTAGCTGACGATGGAAACCGGATCATCTATCGTGCAACCCTGAATTATGATGGGATATTTCGTCTGTATGCGCATTTTAAGAATGGTAGTAGCCAAAATTTGGCAAAATGGCCGGATTTAAAAAGCATGTGTTTAGTAAGAGGTTTTTGTGGATTCAACAGCTACTGTACATTAGATGACGCTCAACCATTATGCTCTTGTCTTTCGGGTTTTATCTCCATACATCCAAACGACTCCACTCTGGGCTGCAAAAGGAGCTTTCTGAAAGAAGATTGTTGGGGGAAGAAAGACAGCGCAACCTCGTATGAGATGAAGTCGGAGGAGAATATTGTGTGGGTGGATTTTCCTTATTTCAAGGCTGAAATGTCACAAGAAGAATGCTCCGCTGCTTGCTTGGCTGATTGCAATTGTGAGGCTGCATTTTACGACGGTGTAAGCTGCATGAAACAAAGGCTGCCTTTGAGATATCTCAGACGGCAATTAAGCGAGTACATAACCTCAGTGTTACTGTGGAAAGTGGGAGACAGCCTCAGCAATCGGACGGAAAACGACAATCCTGTGCCTGTTCCTGAACCACCACCAATCAAAGCAACAAGTAATAAAGCCACAGTGCATATTATTGTCATTACATCCGTATTTTCGCTGCTTTTATGTTCAACCATTGTCGTATCCAGCCACTACACGTTCAAGATTCGGATTTTGAAGTATAAAAGATTGATGGAAACTGGGAACTTGGGCCTGAACGAAGAGGTGACTTTGAGAAGGTTTTCATACAGCGAACTAAAAAGAGCAACAAATAATTTCAAGATAGAACTGGGAAAAGGGTCTTTTGGAGCAGTTTACAAGGGGGCGTTGGACAAAGGTAAGAGGTTGATTGCAGTGAAGAGACTGGAGAAATTAGTGGAAGAAGGAGAAAAGGAATTCCAAGCAGAAATGAGAGCCATTGGAAAAACCCGTCACAGGAATCTAGTTCGTTTGTTGGGTTTCTGTGCGGAGGGTTCTAAAAGGCTTCTGGTGTATGAATACATGTCCAATGGCTCCCTTGGAAACCTTATCTTCGTGGGTGAAAGTCAGAGACGTCCAGAGTGGGATGAGAGAGTAAGAATAGCGGTGGAGATTGCTAGAGGGATAATGTATCTCCATGAAGAGTGTGAGGCGCCAATCATTCACTGTGACATAAAGCCTCAAAACATCTTGGTGGATGAGTTCTGGACTGCCAAAATATCCGATTTTGGGCTTGCAAAACTTCTCATGCCCGACCAAACCAGAACCATGACAGGGGCCAGAGGAACAAGAGGGTACTTGGCCCCTGAATGGAACAAGAATGTCCCAATATCTGTCAAGACTGATGTTTATAGCTACGGAATAATGCTGTTGGAAATTTTATGTTGCAGAAGAAACATCGAAGTTCATGCCCCTGAACCTGAGGCGGTTAGTCTCTGCTCCTGGGCTTATAACTGTTTTGTTGCAGGAAAACTCAATAAGCTTTTTCCTTGGGAAGTGGTGGATGACAAAACTGCCGTGGAAAATATGGTTAAAGTGGCACTTTGGTGTATCCAAGATGAAACTTTTCTTCGCCCAACTATGAAGAGTGTCGTATTGATGTTAGAAGGGGTCACCGACATAGCAATTCCTCCTTGTCCCGCTTCCAATTCTACTTGA 2421 0.442 MDIVAVIITCLLLMSVAVGTRVETHQIPLGTILAAQSTTTPSFWLSPSAQFAFGFYPLEQGGDFVVAIWLVSGENKTVVWTAQRNDPPVTSGAKLQLNMDGKLVLTDDQREEKVIAANFSAKAASASVLDSGNFVLYNSKNDIIWQSFDYPTDTLLGGQSLPNGHQLVCNSSQNNHSSGRFRLKMQDDGNLVLYPVDTTDTGTDAYWASDTSFALNRRDQYQYPLDENGTLRILNESSHGRTKVILSVISNSSLADDGNRIIYRATLNYDGIFRLYAHFKNGSSQNLAKWPDLKSMCLVRGFCGFNSYCTLDDAQPLCSCLSGFISIHPNDSTLGCKRSFLKEDCWGKKDSATSYEMKSEENIVWVDFPYFKAEMSQEECSAACLADCNCEAAFYDGVSCMKQRLPLRYLRRQLSEYITSVLLWKVGDSLSNRTENDNPVPVPEPPPIKATSNKATVHIIVITSVFSLLLCSTIVVSSHYTFKIRILKYKRLMETGNLGLNEEVTLRRFSYSELKRATNNFKIELGKGSFGAVYKGALDKGKRLIAVKRLEKLVEEGEKEFQAEMRAIGKTRHRNLVRLLGFCAEGSKRLLVYEYMSNGSLGNLIFVGESQRRPEWDERVRIAVEIARGIMYLHEECEAPIIHCDIKPQNILVDEFWTAKISDFGLAKLLMPDQTRTMTGARGTRGYLAPEWNKNVPISVKTDVYSYGIMLLEILCCRRNIEVHAPEPEAVSLCSWAYNCFVAGKLNKLFPWEVVDDKTAVENMVKVALWCIQDETFLRPTMKSVVLMLEGVTDIAIPPCPASNST* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2252 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 276 IPR036426 -
Vra7g2252 806 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Vra7g2252 806 Gene3D - 29 150 IPR036426 -
Vra7g2252 806 CDD STKc_IRAK 525 791 - -
Vra7g2252 806 SUPERFAMILY Protein kinase-like (PK-like) 503 790 IPR011009 -
Vra7g2252 806 CDD B_lectin 45 151 IPR001480 -
Vra7g2252 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Vra7g2252 806 SMART blect_4 35 151 IPR001480 -
Vra7g2252 806 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Vra7g2252 806 Gene3D Phosphorylase Kinase; domain 1 486 595 - -
Vra7g2252 806 Gene3D - 151 283 IPR036426 -
Vra7g2252 806 ProSiteProfiles Protein kinase domain profile. 519 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2252 806 PIRSF SRK 1 806 IPR024171 GO:0004674
Vra7g2252 806 SMART serkin_6 519 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2252 806 Pfam D-mannose binding lectin 77 161 IPR001480 -
Vra7g2252 806 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 21 804 - -
Vra7g2252 806 Gene3D Transferase(Phosphotransferase) domain 1 596 797 - -
Vra7g2252 806 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 804 IPR045874 GO:0004672
Vra7g2252 806 Coils Coil 547 567 - -
Vra7g2252 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 211 IPR036426 -
Vra7g2252 806 ProSiteProfiles Bulb-type lectin domain profile. 152 288 IPR001480 -
Vra7g2252 806 Pfam Protein kinase domain 524 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2252 Vra-Chr7 42465435 42469090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2252 438 798 Receptor kinase-like Gene Family AT4G04510 38.421 7.93e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vra7g2252 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2252 - - gmx:100815958 1108.59