Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2251 ATGGCCTTCGTAACCGTTGTGTTTTCACTGCTATGCATGTTATTTGCAAAAAAAGGTAAGAGCGTCATAAAGCCAGGGTCTGGACTCTCTGCTGAATTTGGGAATAATAGTTCATGGGTGTCACCTTCTGGCCACTTTGCTTTTGGCTTTTACCCACAAGGTAATGGCTTTGCTGTGGGTATATGGCTGCTTGGTGGCAGTCCACCTCAAAAAACTATTGTGTGGACTGCTAACCGTGATAGCCACCCACTCCCCTCAAATTCAACGTTGAACATCACCACCACTGGTCTGCGGCTTTTCTTAAGTGGGAGAGAAAGCCTTGTTCTCATTCCAACTGTTAATACAACTTCAGCATCTATGCTTGATTCTGGAAACTTTGTGCTCTATAGCAATGGCAGTACTGTTGTTTGGCAAAGCTTTGATTATCCAACTGACACCTTACTAGGAGGTCAGAATTTAACTAGTGGCGCCGAACTGGTTTCCAGTGTGTCCGAAAAAGACTATTCGAGTGGAGCTTTCTATATGCTCATGCATCAAGATGGAAACCTCGTTGCTTATCCAAAGAACAGCGGAGGATATTTCGTTGATGCTTACTGGGCTTCAAACACTTTTGACGACTCAGAGCTCCTCGGACTTGATGCCACAGGCTCTCTTTGCATTGGGATTTTGTGTTTGAACGAAAATTTTAGCCCTAGAAACAAATCACACAACACAAGTTCAATCTACCGTGCCACACTTGCTGCAGACGGGAACCTGATACTATATGAACACCAATTTGAGGACAGCGTTGGCTCTACAAATGTCCGAGTATTGTGGAGTACCTCGATTGAGAAATGTCAAATCAAGGGGTTTTGTGGGTTTAACAGTTATTGCTCAAACGTAACAGGAGATGCGGTGTGTGAGTGTTTTCCTGGTTTCGTCCCCTCCAACAACAGTGGTAACGTGTCTCAGGACTGCATACTGGCCTATGCACTAGATGGTTGCCGAAGCAGAGAAGCCCCAAACCAAATGATTTTGTATAATATTACTCAGTTGGAACATGTGTCTTGGTTCGATACTCCATATTCTGTCGTACCGATGAAGGAGAAAGAGTGCGAAAAGTCTTTACTGGATGATTGTGATTGCGTGGCAGTGTTATATTCAAATGGCAACTGCGAGAAATACGGACTCCCGCTAACATATGGCAGATGGCTTCAGAATTTATCCGTCGTTGCACTCTTCAAGAATGCTTCAGGAACCGTCCAAAATCTAATTCCAAGCAACTTCTTTCCGAAACCTAAATCCAAGGTGGTTACGGATAACAAGAACAGTCTGATAATGATTCTGGCCTTTACTTTGGGTTCCATTTCATTCTTATCTTTGATATTTTCCGTGTCCATTTTCTTCACTTACAAGCGGAAGGTACATAAGTATACAACGTTGTCTGCCAGTGAGAACCTGGGATTTACTGGAGAATGTTCTCTGCGTTCGTTTTCTTTCGATGAACTTGTCAAATCCACTGGAAACTTCACGGAAGAGATAGGAAGAGGATCATTTGGAGCGGTTTACAGAGGCGAAACAGGTGACGACAGCCAAAGTATCGCTGTAAAGAGATTGGAGAGAGTTGCTGCCGGTGACTGGGAGAGGGAATTCCGGAATGAGATTACTTCTATTGCTCGAACACATCACAGGAATTTGGTTAAGCTCATTGGTTTTTGCATCGATGGAGCTAGGAGTCTCCTTGTTTACGAATACGTAAGAAACGGATCTCTGGGAAGTCTTCTCTTCAATGATGAGAAACAGATATCCTGGAGAGACAGACTAAAAATCGCATTGGATGTTGCTAGAGGAATCCTTTACCTACACGACGAGTGTGAGGTCCGCATCATCCATTGCAATATAAATCCTCGAAATATACTAATGGATGAAGCGTGGACTGCAAAGATCTCTGATTTTGGATTTGCAAGACTACTGAAGTCTGAGCATTCAAGAATGAGAAAAGAGGATGATGGGACAAGCAAGTACTTGGCACCTGAATGGCAGAAGGAAGCACCAGTGTCGGTAAAATTTGACATTTACAGTTTTGGGATGGTGCTTCTGGAGATCGTGTGCCGCAGACGCAGCATAGAAATGAATGTTTCCTCAGCAGAGGAGATAGTTCTTTCCAGCTGGGTATATAAATGTTTTGCAGAAGGGCAACTAAACAGGCTTGTTAAGGAGGATGAAGGTGTTGAGTGGAAGATAATGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACACTCCTTCTCTTCGCCCCTTGATAAAGAATGTAATCTTGATGTTAGAAGGATTGAAAGATATTCCAATTCCTCCCTCTCCAGCCCACCCTCTTCATTAA 2364 0.4365 MAFVTVVFSLLCMLFAKKGKSVIKPGSGLSAEFGNNSSWVSPSGHFAFGFYPQGNGFAVGIWLLGGSPPQKTIVWTANRDSHPLPSNSTLNITTTGLRLFLSGRESLVLIPTVNTTSASMLDSGNFVLYSNGSTVVWQSFDYPTDTLLGGQNLTSGAELVSSVSEKDYSSGAFYMLMHQDGNLVAYPKNSGGYFVDAYWASNTFDDSELLGLDATGSLCIGILCLNENFSPRNKSHNTSSIYRATLAADGNLILYEHQFEDSVGSTNVRVLWSTSIEKCQIKGFCGFNSYCSNVTGDAVCECFPGFVPSNNSGNVSQDCILAYALDGCRSREAPNQMILYNITQLEHVSWFDTPYSVVPMKEKECEKSLLDDCDCVAVLYSNGNCEKYGLPLTYGRWLQNLSVVALFKNASGTVQNLIPSNFFPKPKSKVVTDNKNSLIMILAFTLGSISFLSLIFSVSIFFTYKRKVHKYTTLSASENLGFTGECSLRSFSFDELVKSTGNFTEEIGRGSFGAVYRGETGDDSQSIAVKRLERVAAGDWEREFRNEITSIARTHHRNLVKLIGFCIDGARSLLVYEYVRNGSLGSLLFNDEKQISWRDRLKIALDVARGILYLHDECEVRIIHCNINPRNILMDEAWTAKISDFGFARLLKSEHSRMRKEDDGTSKYLAPEWQKEAPVSVKFDIYSFGMVLLEIVCRRRSIEMNVSSAEEIVLSSWVYKCFAEGQLNRLVKEDEGVEWKIMERMVKVGLWCVQDTPSLRPLIKNVILMLEGLKDIPIPPSPAHPLH* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2251 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 204 IPR036426 -
Vra7g2251 787 SUPERFAMILY Protein kinase-like (PK-like) 484 771 IPR011009 -
Vra7g2251 787 Gene3D - 143 265 IPR036426 -
Vra7g2251 787 Gene3D Phosphorylase Kinase; domain 1 464 578 - -
Vra7g2251 787 CDD EGF 279 311 - -
Vra7g2251 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 785 - -
Vra7g2251 787 SMART blect_4 30 143 IPR001480 -
Vra7g2251 787 Gene3D - 16 142 IPR036426 -
Vra7g2251 787 Pfam D-mannose binding lectin 72 154 IPR001480 -
Vra7g2251 787 SUPERFAMILY EGF/Laminin 276 312 - -
Vra7g2251 787 ProSitePatterns Protein kinases ATP-binding region signature. 507 530 IPR017441 GO:0005524
Vra7g2251 787 PIRSF SRK 1 786 IPR024171 GO:0004674
Vra7g2251 787 ProSiteProfiles Bulb-type lectin domain profile. 24 141 IPR001480 -
Vra7g2251 787 ProSiteProfiles Protein kinase domain profile. 501 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2251 787 Pfam S-locus glycoprotein domain 236 309 IPR000858 GO:0048544
Vra7g2251 787 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 7 785 - -
Vra7g2251 787 Pfam Protein kinase domain 504 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2251 787 Gene3D Transferase(Phosphotransferase) domain 1 579 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2251 Vra-Chr7 42462630 42465273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2251 423 787 Receptor kinase-like Gene Family AT4G18250 37.401 6.32e-64 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vra7g2251 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2251 - - cam:101496142 883.634