Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2217 ATGGACGCCCTCTTCTCCTCCCTCTCCTTCATCTTCCTTCTCTTCCTCCTCAAGCTCACCGTCCTCCTCTGGTGGCGACCCAGAAAAATTCAAGGCCACTTCTCCAAGCAAGGCATCCGAGGACCCCCTTATCGTTTCTTCATTGGCAACGTTAAGGAGCTTGTCGCCATGATGTTGAAGGCCTCCTCCAAACCCATGCCTTTCTCCCACAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTATGGTGCAACATTCCTAGTTTGGTTTGGACCCACCGTTCGTCTCACCGTCTCTGATCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCAGAATTTTACGAGAAAAACGAAGCTCCACCCCTTGTGAAGCAGCTCGAAGGCGATGGCCTCCTCAGCCTCAAAGGAGAAAAATGGGCTCACCATCGAAGGATTATCTCTCCCACTTTTCACATGGAGAATCTAAAATTGTTGATACCGGTGATGGCTACAAGCGTGGTTGAGATGTTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGTGAGGTGGAAATCGAAGTTTCGGAGTGGTTTCAGAGACTGACAGAAGACGTGATTACGAGGACTGCATTCGGAAGCAGCTACGAAGACGGGAAAGCCATTTTCCGGTTACAGGGTCAGCAGATGGACTTGGCTGCCGACGCCTTCCAGAAAGTATTCATTCCAGGTTACAGATTTGTGCCCACAAGGAGGAACATAAAGTCGTGGAAGTTGGAGAAGGAAATAAAGAAATCGCTGGTGAAACTGATAGAGCGACGGAGGGAGACTTCGGAGAAGGTGGTGGAGAAGGGAGCGAAGGATTTGTTGGGGCTAATGATTGAGGCGTCGAACACGAATTCGACGAATGTGACAGTGGATGACATTGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGGAAACAGACCACATCCAACCTGCTGACGTGGACGACCATTCTCCTAGCTATGCACCCACAGTGGCAGGTACGGGCACGTGAGGAGGTTCTGAAGATGTGTGGATCACGTGACCTTCCGACCAAAGACCATGTCGCAAAGCTGAGGACGGTGAGCATGATTGTGAACGAGTCGCTAAGGCTGTACCCGCCGACGATCGCCACAATCAGACGTGCCAAGACGGACGTGGAGTTGGGGGGGTACAAGATACCACGTGGGACGGAACTGCTGGTTCCAATCCTGGCCGTTCATCACGATCAAGCCATATGGGGAAACGATGCTAACGAGTTCAATCCTGGGCGTTTCAGCCAGGGGGTGGCCCGCGCCGCGAACCATCCTCTGGCCTTCATACCCTTTGGAGTGGGTGTGCGCACATGCATAGGACAAAACCTGGCAGTGCTACAAACCAAACTGGCCCTCGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTCATGCTACTCTACCCTCAGTACGGTGCACCAATCATTTTCCAACGCTTCTCCACTCCTCCGCCTCCTCAACCATCTTCCGACGCAACTGTATAG 1566 0.5179 MDALFSSLSFIFLLFLLKLTVLLWWRPRKIQGHFSKQGIRGPPYRFFIGNVKELVAMMLKASSKPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMGEKGEVEIEVSEWFQRLTEDVITRTAFGSSYEDGKAIFRLQGQQMDLAADAFQKVFIPGYRFVPTRRNIKSWKLEKEIKKSLVKLIERRRETSEKVVEKGAKDLLGLMIEASNTNSTNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVRAREEVLKMCGSRDLPTKDHVAKLRTVSMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLVPILAVHHDQAIWGNDANEFNPGRFSQGVARAANHPLAFIPFGVGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQRFSTPPPPQPSSDATV* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2217 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Vra7g2217 521 SUPERFAMILY Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PANTHER CYTOCHROMEA2 5 502 - -
Vra7g2217 521 Pfam Cytochrome P450 77 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 502 - -
Vra7g2217 521 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2217 521 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2217 Vra-Chr7 42196013 42199609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2217 8 509 Cytochrome P450 AT2G26710 77.559 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2217 K15639 - gmx:100780027 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2217 7 42196013 42199609 Vra7g2217 7 42196013 42199609 ECH
Vra2g1565 2 23551882 23555439 Vra7g2217 7 42196013 42199609 PCT