Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2170 ATGTCTGGGCTTGAACTTGTTGGCCCTCTTGTTGGAGAGATGGGATCGATTGGGGTTGGAGAAATGCATACTACAATTGCATCTAAAATTGCATTTTCCAAAAATCTGGATGACAATTACAACATTTTGGTTAAAGATACAGAGATGCTACATGCAATAAAGAAGGATAAAGAGATGAAAGCTCAAAGAAACAGCCATAAAGATACTACCAATGCTTACAAACTGTGGACAAACAGGGTATCTGAGGCCACTGAAGAAGCACAGAAGCTGAAGCTTAAATATGAAGAAAAGACCCTACCCTGGTGGCGGATTCAAAAACGTTCCCATCTAAGTGAAGAAATGGAGAAGAAGAGCAATTGTGTTCGTCAACTTATGAATGATGAATGTTTAAAAGAATTTCTTGTTGATAAACCACCAGAGCCTGTTTTAAAGGAGTTAAATGTTCCACAGATAAGTGGATATCCAACCCTTCAAGGCGCCTTGGATAATACTCTGGTTTTGCTGAAAAATAATAAGATCAAGATCATTGGAATGTGTGGAACAAAAGGGGTGGGGAAAACAACAATAATGCGGAATCTAAACAACAATGAAGAAATAGCTAAACTGTTTGAAATTGTCATCTTTGTAAAAGTCACATCTAATGATCGTAAGCTTCAAGAGAAAATTGCTCATCGGTTGATGTTGGACAAAGGGGTCAACAATGAGGATAGTGACGATGTTGCAAGAAGAATACACAGAGAGCTAGAGAAGAAAAGATATTTATTAATTTTGGACGAGGTTGAGGATGCCATCGATTTGGAGCTGTTGGGAATCCCAAGTGATAATAACAATGGCAGTAAGGTGGTAATTGTCACTCGATTCCCTCTTGTTTATAAGTTGAATAGGGTGCAGAGGGTCATCAAAGTCGCGGAGCTATCTCCCGATGAAGCATGGAAGATGTTTAGAGATACTGTCCATGCCTTCAATCCTAAGATTGATTCCCCTGACATTCAACCAACTGCAAAACTTGTATGCAAAAGATGCTCTCGTCTTCCACTTCTCATTTACAATATAGCAAACTCTTTTAAATTGAAAGAGTCTGCTTCTAGTTGGTGGGCAGGACTTGAAGATCTTAAACCGTGGCCAGAACTTCAAAGCCAAGGTTTAGAAGAATTGTACTCGTGTCTGAAGTTCTGTTATGATGAACTAAACGATAAAAGGAAGCAGAAATGCTTTCTATACACTTCACTGTATCCTGCAGATAGCAAGGTTTACTCTGATTATTTAGTGGAGTGTTGGGCAGCACAAGGTTTACTTGGTGACATAAATGATACAAGGTCATATCAAAGTGCACGCAATTGTGGTATTGACATATTAGAACATCTTGCTAATGTCTCTCTACTAGAGAAAGGGGAAGCAATGATATATGTTAACATGAACCATTGCATGAGACAACTTGCATTGCACATATCCTCTAAAGATCCTGAGTGTAGCTTTTATCTCCAAGACGGTGAAGAATCTGAAAATCTCTCAAATTCAAGAGCTTGGCAGCAGGCTAGGTGGGTCTCTATGAGACAAGTACATGAGTTACGAAGAAGTCAAGATTGCAGCACGATTTTGACACTGTTGCTGAGAAAAAATCCCGAGCTAACTGCACTACCAGAGTGTTTTTTTGAGAACATGAGCAGTCTACTTCTGCTAGATTTGTATAGTAGCATGATTACACAACTGCCATCATCTCTATCAAAATTGACTGTTCTACGGGGTTTATTCTTGAACAGGTGTGAGCTATTGGAATCACTATCATCTGAAATAGGATTACTTCAATTTCTAGAGGTCCTTGACATACGTGATACTAAAGTAATTTTCATACCTCTACAAATTGGATTCTTGACTAAGCTAAGATGCCTGCGAATCCCATTCATTGCAAGTGAAGATAATGAAGCTCAAAATGTTCATGTGATTTCAAAGCTTCATAGGTTGGAAGAATTAACTATTCAAGTCATATCCTACGAACAGTGGTGCAATGATGCTAAAAATGTGCTGGCACATGTGGCTTCTTTGGAAAATGTAAATCATCTCAGATGTTGTTTTCCCTCCTCAATCATTCTTGGAGAATTTCTTTCAAGAAGCAAATCATGGCATAGGAAGCAGAATTCATTTAGATTCACTGTAGGATGCCAGAACTCAAGGCGACCTCAAATACTTGAATCCTTTGAATATAAAATTACTAATTATTTGAGGTACTGCAATGGTGGACAGAAGGATGACCCGGCAATTATTGAGGTACTACCAAAAACTGATGCATTTGAATTAGTCTGCCATAAAGATATAAAAAAATTGTCCAATTTTGCTGGCATAGCTTGTTTGGAACGCATTCGTGGTCTTTTGATTGAAAGATGCAACCAAGTTTTGACAATTGTGTCAGGTGAAACAAGTAGGAATGTCATGAACGGAATCCAAATAGAAACGGCAGTCATCTTACCAAATTTGGAGCAACTTTATTTGGAAAATTTGCTCAATTTAAAATGTGCTTTTAGAGGCCCCCTGCATAGTGGAACATTTTCCAGATTACAAACTCTGTCATTGAAAAATTGTCCAAGACTGAGTCAAATTTTCAGCAATGGAGCAATTCAACATTTTTCAGAACTTCAGAAGCTGAAACTTGAAGATTGTTCAAAAATTGAAGAACTTGTCGGAGAAGACATTGAAAGAGAAAGGGATGTGCTTCCAAAACTGGAAATACTTCTGCTAGTTAACTTGCCTAACTTCAAAAGTATATGCGCAACTCATACATTGGCCTGGTCCTCTTTGGAGCTGTTAAGGATACATAACTGTCATAAGTTTAAAACTTTACCACTGGACAGTGTCAATGCAGTCAATTTAAAGTCCATTAAAGGACAGCAAGAATGGTGGGCTAACTTGGATTGGACAAACAATGAAGAGGTTCTTCAGCGATTGCAACCCATATTTGTTGCTTCCAATGAGTATTTTTCTTAA 2979 0.3813 MSGLELVGPLVGEMGSIGVGEMHTTIASKIAFSKNLDDNYNILVKDTEMLHAIKKDKEMKAQRNSHKDTTNAYKLWTNRVSEATEEAQKLKLKYEEKTLPWWRIQKRSHLSEEMEKKSNCVRQLMNDECLKEFLVDKPPEPVLKELNVPQISGYPTLQGALDNTLVLLKNNKIKIIGMCGTKGVGKTTIMRNLNNNEEIAKLFEIVIFVKVTSNDRKLQEKIAHRLMLDKGVNNEDSDDVARRIHRELEKKRYLLILDEVEDAIDLELLGIPSDNNNGSKVVIVTRFPLVYKLNRVQRVIKVAELSPDEAWKMFRDTVHAFNPKIDSPDIQPTAKLVCKRCSRLPLLIYNIANSFKLKESASSWWAGLEDLKPWPELQSQGLEELYSCLKFCYDELNDKRKQKCFLYTSLYPADSKVYSDYLVECWAAQGLLGDINDTRSYQSARNCGIDILEHLANVSLLEKGEAMIYVNMNHCMRQLALHISSKDPECSFYLQDGEESENLSNSRAWQQARWVSMRQVHELRRSQDCSTILTLLLRKNPELTALPECFFENMSSLLLLDLYSSMITQLPSSLSKLTVLRGLFLNRCELLESLSSEIGLLQFLEVLDIRDTKVIFIPLQIGFLTKLRCLRIPFIASEDNEAQNVHVISKLHRLEELTIQVISYEQWCNDAKNVLAHVASLENVNHLRCCFPSSIILGEFLSRSKSWHRKQNSFRFTVGCQNSRRPQILESFEYKITNYLRYCNGGQKDDPAIIEVLPKTDAFELVCHKDIKKLSNFAGIACLERIRGLLIERCNQVLTIVSGETSRNVMNGIQIETAVILPNLEQLYLENLLNLKCAFRGPLHSGTFSRLQTLSLKNCPRLSQIFSNGAIQHFSELQKLKLEDCSKIEELVGEDIERERDVLPKLEILLLVNLPNFKSICATHTLAWSSLELLRIHNCHKFKTLPLDSVNAVNLKSIKGQQEWWANLDWTNNEEVLQRLQPIFVASNEYFS* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2170 992 Coils Coil 73 93 - -
Vra7g2170 992 Gene3D - 145 300 IPR027417 -
Vra7g2170 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 407 IPR027417 -
Vra7g2170 992 Gene3D - 304 392 IPR042197 -
Vra7g2170 992 PANTHER DISEASE RESISTANCE PROTEIN RP 30 885 IPR044974 GO:0006952
Vra7g2170 992 Gene3D - 393 482 IPR036388 -
Vra7g2170 992 PRINTS Disease resistance protein signature 175 190 - -
Vra7g2170 992 PRINTS Disease resistance protein signature 247 261 - -
Vra7g2170 992 PRINTS Disease resistance protein signature 341 355 - -
Vra7g2170 992 PRINTS Disease resistance protein signature 846 862 - -
Vra7g2170 992 Pfam NB-ARC domain 167 395 IPR002182 GO:0043531
Vra7g2170 992 SUPERFAMILY L domain-like 515 960 - -
Vra7g2170 992 Gene3D Ribonuclease Inhibitor 755 969 IPR032675 -
Vra7g2170 992 Gene3D Ribonuclease Inhibitor 494 712 IPR032675 -
Vra7g2170 992 SMART AAA_5 172 307 IPR003593 -
Vra7g2170 992 PANTHER - 30 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2170 Vra-Chr7 41583236 41587137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2170 173 565 WRKY Transcription Factor Family AT5G45050 21.898 3.53e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2170 - K13459 gmx:102661619 1678.3