Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2169 ATGGCTTCCGCAGTGTTTGTGAGTTTCAACGATGAAGACACACGCGACACAACAGTTTTTGTTCTTGATCCTCTCAGAAGTAGAGGCATCCAAGTCTTCGTTAAAGGTGAATCCACAACTTTTGACCTGTTTCAAGTGATTGAGCGCTCCCGCCTTTTCATCGTGGTCCTTTCCAAGAACTACGCTTCCTCAATTTGCTGTTTGCGTGAACTAGTGGCGATCATCAATGCTGTTGAATCTTCTCCAAGGTTCCTTCTGCCTATTTTTTATGGTGTCCATCAATCTAACGTGCTGTCTCAGAATGGATGCTATGTTCAAGCCTTTTCGAAACACGAAGAAAGATTCAGGGAACATAAAGAGAGGATGGAAGAAGTGCAGAGATGGAAAGAAGCTCTCACACGAGTGGCCGCTTTCCCGGGTTGGCATATGGAAAATGCGAAAGGAGTTGAAGGTCGTCGTTTTGTTCAACATGCAGTCGATATTTTGAGTCGTGAATTTTCAACTCCTCAAAATGAAACAATATTCAATAGATATGGAAAATTTGAAGATATTGTTCAATATAAAGATGGAGATGAAGTTTCATACAAGGAGCTGCGAGGTTTGATTAGGTTAAGGGATTTTATCAGCCTCGTGCTGACATATCCAGTGAAATTAGAAGAGGACGGTGTATTAAGATCCTGGATTAGTGCATTTCCTGAATGGAAAGCTCAGTTATTTTCCACATATGGTTTTCCTGGGATTTGCAAACCATGGAGTCTACTAACCGAGAAGGCACTGGGATGCATGAAAGGATTCATGCCAGTGGAAATGATGGCTGAAATAGAAAGTGGCCAGAGATCCCTATTCAACCGCAACAATGATGTAATACCAGAAGGCCTTCTCCCCCTAACTGTTGATCTCGCAGTTGACCAACTAATTCAAACTTTGTTTTCTGGAGATTACCGTGCGCGCTATATCAGATTGTTGACCAGAAACTCATCTGAAAAAGAATCTGTAGTAAACAAAATACATACAGCCTTGAAAGATAAACACAACATGTTTGGAATTGACAAAGATTTTCTGACGGACGTTTGGATCAATGCCTTGACATGTGAGACTGATGCGGAAGTTTACATTCAAGAAGAAATCAATAAGGTCATGGTGAGTATTTCTATGACAGAAGGTGATGACATGTTAGTAGACACTGACAAAAAGAAGAGGAGCAATAGGCTGTTGGTGATTGTAGTTGATGCAGATAGCAACAGGAAGCTGGACCTCCAAAAAGTGCAATTTCCTAGTGGGATAGTGGTGTTGATAGCAACTGAGTCTTCAACACAAGCGGTGAAGGATGATGACTTTGGAATTGCATGCACAATGGATTTGAATATTTGGACCCAGGATCATATGTTGCCTTGGAAGCTCTTCTATACGTATGTGCGAAGTTGTATTAGTTGTAGCACATTGGGTTCGTCAACGACCATTCAGGAAATAGCGGTGGAAATAGTCAAGAAAAGCCGTGGCCATCTTCTTGCCATTGTCCTTGTGGCAAAACATCTTAGGTATGTGAAAGATGATAAATACTGGGAGTTTGTACTTGACAAATTAAGCAACCCGAGTCCTTTCTATGATTATCAAGATTGTGACCGAATTGGCATTAGCAGAGTCATGGTCAATGCATTTGTAAATATTATTTGGGAAGACATCGATGACGAACTAAAGCTTTGCCTCCAACTCAGTTTACCTGTTGACAACATTAAAAATGGGGTGAGAGATGATATCTTGGTTTCTTATTGGGCTAATACATTACGATACACACAAGAGCTTGGTGAATACAAGAGACAGTTACCATATTACCTCGAGGAGCTTCTAGACTGTTTTGTCTTGTTGAAGTTTGAAAGTAGAGTTGTCTATTTGCCAATAGAAACCTATGATATAATTAAATCATTACACATCTCAAAACCTTCCATCATATGGCATGGTGCATTAGGATTGACGGATATTGGACAATGGCATAGTCTTATTCAGATAGAATTGGTTAACAAAAATATATGTGAACTACCAGAATCACCAGACTGCCCCAAACTCGAAGTGTTGTTGTTGCAGGGCAATGCTGATTTATTGGATATCCCTGATTTATTTTTCGACCACATGCCTCTACTTCAACACTTGGACTTATCCTACACTAGTATAGGGGATTTGCCCCCTTCTCTCACCAAATTGATGCAACTTAAGAAATTATATCTTAAAGGTTGTGATCTCATCATGGAAATATCCCCGCAAATTTTTCAGCTGAAGAATCTTGAAGAGCTTGATCTTGACGGGACTTTGATAACCCATTTGTCAAAAGACATTCGAGAATTGATCAACCTGCAACGCTTAGTCCTATGCTTTGAGGCATACCATCATGTACGTAGTCGTGGTAAAAAAGGCAACCAGATTTCTAACACAATGATAATTCCTCCTGGAGTGATATCAAATCTTACTCAGTTGAATTATCTAAGCCTTGACGTCGACCCTGAAGATGAGCAATGGAGCGAGAACGTTAATAGTGTCTTGTTGGAAATTTTGGGACTAGAGAAGTTGAAGACGGTGAGCATATATGTTCCAAAGGCTGATCTCTTGGAACTCATACCAGCCGAAAAATCTCTCAATTTCCGATTGGTTGTTGGTCGTCACATGCGGCGTCTAATATCCCGTGTAACACCTGAACTAGAGACAAAATTCAAAGATTTTGACTATAGCATGAAGTTTGTTAATGGTGTAAATGTTCCCAATGGAGTAAAGATGAATCTTGGTCGCTTCGAGGCTTTGTACCTTGACCGACATATGACCATTAAGAGTCTCTCGGATTTCAATTTGAACAACGTACGGAGGTTGAAAGTTTGCATATTGGCGGAATGTAATGAAATGGAAACAATTGTCGATGGTGATAATTCACCTCAACTTTTTTGTCTGGAGTTGTTGAGTGTATTTTATATGAAGAATTTAAGAAGCATTTGCCAACGATGTGACCCCTTTTCCTACTTAAAGTATATGGCATTACACACTTGCCCCATGTTAACTACTATCTTCACCTTACATACTTTTTTCATACTTCCCTTTTTGGAAGAGATTAGTGTTGAAGACTGTCCAAAAGTAACCACCCTAATAAGTCACAACTCACCAAAACTTGAACTAACGTTTTTCCTGCCCAAGTTAAGAGTGATATCGCTTCTTTATCTTCCCAACTTGGTGAATATTTTTAATGGCCTACGTGTTGAACATGTTTTAGAAGAAATGATTTGTTATTGTTGCCCAAAACTCCAAAGTCTTTCCAGATCGGAGTTATCATCGAGTTATTTGAAGTTCATCAAAGGAGAAAGGATGTGGTGGGAAGCATTGGAATGGAGAGTATCAGAGTGGGGTTTTGGTGGTCGACCCAAATTCTTTGACCAATTTTTTAAACCAATTAAGGTGGAGGCCGACATGATGAACCCACCAGCTGCACATCAAGACACTCAAGTAAATGAATATCACGGTACAATGTATCAGGGAGTTTCAAGTTCTACCGAGTTGATGTCGAAGTTACATTTAGAAACGCCTCTTTTGTTGCCTTCAACCCCATTTCCGTTGTCGGATAGCAAAGAAGGTGAAGCCCAAAAGCGGAAAGCCGTTATTGAGCCAATAGTAGTACCACCGTTGTTAAGAAGGAAACCAAACCAGGGTGGTTATAAAAGAAGACTTCTCCCCCAAGCTGTCAAAGAGATACGTACTGATCAGACTTTAGATGATGGATTTAGCTGGAGAAAATATGGGCAGAAGGACGTTCTTGGAGCTAAGTATCCCAGAGAATATTACCGCTGCCCACATAAAAGCACACAAGGGTGCCCAGCATTAAAAGGTGTTCAAAGGTTAGATGGCGACCCAACAACATTTGAGGTAGCTTACAGGGGAACTCATAGTTGCACCCAAAAACAGGATTTAATAGCAGAAAGTGGAGATGCCGAAGTATTAGAAGATTTTGGGGGAAAAGCAAATTCTGCATCATCTAGCAACAAAAGTTCTATTACTGTTTTGGAGGAAATATCAGCTGAACCGGAAGAACTTCAGATGAGTCTACCTTAA 4083 0.4029 MASAVFVSFNDEDTRDTTVFVLDPLRSRGIQVFVKGESTTFDLFQVIERSRLFIVVLSKNYASSICCLRELVAIINAVESSPRFLLPIFYGVHQSNVLSQNGCYVQAFSKHEERFREHKERMEEVQRWKEALTRVAAFPGWHMENAKGVEGRRFVQHAVDILSREFSTPQNETIFNRYGKFEDIVQYKDGDEVSYKELRGLIRLRDFISLVLTYPVKLEEDGVLRSWISAFPEWKAQLFSTYGFPGICKPWSLLTEKALGCMKGFMPVEMMAEIESGQRSLFNRNNDVIPEGLLPLTVDLAVDQLIQTLFSGDYRARYIRLLTRNSSEKESVVNKIHTALKDKHNMFGIDKDFLTDVWINALTCETDAEVYIQEEINKVMVSISMTEGDDMLVDTDKKKRSNRLLVIVVDADSNRKLDLQKVQFPSGIVVLIATESSTQAVKDDDFGIACTMDLNIWTQDHMLPWKLFYTYVRSCISCSTLGSSTTIQEIAVEIVKKSRGHLLAIVLVAKHLRYVKDDKYWEFVLDKLSNPSPFYDYQDCDRIGISRVMVNAFVNIIWEDIDDELKLCLQLSLPVDNIKNGVRDDILVSYWANTLRYTQELGEYKRQLPYYLEELLDCFVLLKFESRVVYLPIETYDIIKSLHISKPSIIWHGALGLTDIGQWHSLIQIELVNKNICELPESPDCPKLEVLLLQGNADLLDIPDLFFDHMPLLQHLDLSYTSIGDLPPSLTKLMQLKKLYLKGCDLIMEISPQIFQLKNLEELDLDGTLITHLSKDIRELINLQRLVLCFEAYHHVRSRGKKGNQISNTMIIPPGVISNLTQLNYLSLDVDPEDEQWSENVNSVLLEILGLEKLKTVSIYVPKADLLELIPAEKSLNFRLVVGRHMRRLISRVTPELETKFKDFDYSMKFVNGVNVPNGVKMNLGRFEALYLDRHMTIKSLSDFNLNNVRRLKVCILAECNEMETIVDGDNSPQLFCLELLSVFYMKNLRSICQRCDPFSYLKYMALHTCPMLTTIFTLHTFFILPFLEEISVEDCPKVTTLISHNSPKLELTFFLPKLRVISLLYLPNLVNIFNGLRVEHVLEEMICYCCPKLQSLSRSELSSSYLKFIKGERMWWEALEWRVSEWGFGGRPKFFDQFFKPIKVEADMMNPPAAHQDTQVNEYHGTMYQGVSSSTELMSKLHLETPLLLPSTPFPLSDSKEGEAQKRKAVIEPIVVPPLLRRKPNQGGYKRRLLPQAVKEIRTDQTLDDGFSWRKYGQKDVLGAKYPREYYRCPHKSTQGCPALKGVQRLDGDPTTFEVAYRGTHSCTQKQDLIAESGDAEVLEDFGGKANSASSSNKSSITVLEEISAEPEELQMSLP* 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2169 1360 Pfam Leucine rich repeat 686 746 IPR001611 GO:0005515
Vra7g2169 1360 SUPERFAMILY WRKY DNA-binding domain 1244 1310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2169 1360 Pfam TIR domain 5 144 IPR000157 GO:0007165
Vra7g2169 1360 ProSiteProfiles TIR domain profile. 1 159 IPR000157 GO:0007165
Vra7g2169 1360 ProSiteProfiles WRKY domain profile. 1243 1307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2169 1360 Gene3D WRKY domain 1236 1310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra7g2169 1360 Pfam WRKY DNA -binding domain 1249 1308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2169 1360 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 142 IPR035897 -
Vra7g2169 1360 SUPERFAMILY L domain-like 660 1040 - -
Vra7g2169 1360 SMART WRKY_cls 1248 1310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra7g2169 1360 Gene3D Ribonuclease Inhibitor 631 850 IPR032675 -
Vra7g2169 1360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 569 IPR027417 -
Vra7g2169 1360 SMART till_3 2 138 IPR000157 GO:0007165
Vra7g2169 1360 Gene3D - 2 173 IPR035897 -
Vra7g2169 1360 Gene3D - 463 541 IPR042197 -
Vra7g2169 1360 Gene3D Ribonuclease Inhibitor 917 1111 IPR032675 -
Vra7g2169 1360 PANTHER - 521 1131 - -
Vra7g2169 1360 PANTHER PROTEIN LAP1-LIKE 521 1131 - -
Vra7g2169 1360 SMART LRR_typ_2 710 733 IPR003591 -
Vra7g2169 1360 SMART LRR_typ_2 757 780 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2169 Vra-Chr7 41532089 41547690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2169 1231 1310 WRKY Transcription Factor Family AT4G23810 59.302 2.39e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra7g2169 TIR 1.5e-21 CL0173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2169 - - vun:114178693 2113.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2169 7 41532089 41547690 Vra7g2169 7 41532089 41547690 ECH