Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2145 ATGGGTAAGTCCTCTTTCTCCTTCCGCCGCTCCGTCTCTCGCCGCCGGACCAAGAAGACCACAGCGCCACCCCCTCGCCGGTCCCCGCCACAGCCTCCCTACGCCGCTGGGATCACCGCTTCGCCGGATGGAGCCGCAAACAATGGCCTCGTCGCAGGTGCAGGTGCCAGCGCGTTGACCAAGGTGAAGAAGAAGACCGGCAGCGCTCGGCTCTGGATGAGATTCGACCGGTCCGGTAGGTCCGAGCTCGTGGAGTGGGAGAAGAACGCCATCGTCCACCATGCCGCGATTCCCGCTCGAGACCTGAGAATCCTTGGCCCCGTCTTCTCCCACTCCTCGAACATCCTCGCTAGAGAGAAAGCAATGGTTGTTAATTTGGAGTTTATAAAGGCTATAGTGACTGCTGAAGAAGTGCTACTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCAGCAGCTTCCGGGCAAGTCTCAACCGAAACTTCTCGGCGCCGTGGAGGAGCAGGAAGGTGAATTACTGGGTTCTAATGGCAGACAATGGTTGCCTACGCTGGAGACGGTTGAAGGTTTGCAGTCTGAACTTCCGTTTGAGTTTCAAGTTCTGGAAATTGCTTTGGAGGCTGTATGTACTTATCTGGACTCCAGTGTAGCAGACCTTGAGAGAGGTGCTTACCCTGTGTTGGACGAATTGGCTAGGAATGTTAGTACCAAAAATCTTGAACATGTGAGGAGTTTGAAGAGTAACCTCACGCGGTTACTGGCACGAGTGCAGAAGGTACGGGATGAAATTGAACATTTATTAGATGACAACGAAGATATGGCACAACTATATTTGACAAGGAAGTGGCTTCTGAATCAACAAATTGAGGAGGCTCAATTGGGTGCCACAACCTCAAATAACCTTCCTAATTCCGCCCGTTCTGTTCGACGCCTTGGTTCTACCAGAAGTGAAAGTCTTGCAACCAGCCATTATGGGGAAGATAATGATGTGGAGGACTTGGAGATGTTGCTTGATGCATATTTCATGCAGTTAGATGGGACTCGTAACAAGATATTATCTGTGAGGGAGTATATTGACGACACCGAAGACTATGTCAACATCCAACTCGATAACCATCGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCATTTGCTATTGCTATTGATACTTTGGTTGCGGGTGCATTTGGTATGAACATTCCTTGTAAATTGTATGATATAGATGGAATATTTTGGCCCTTTGTTTGGATCTCGTCTGCAGCTTGTGTACTCCTTTTCTTGCTTATTTTAGCATATGCAAGATGGAAAAAGTTGTTGGGATCATAA 1356 0.4875 MGKSSFSFRRSVSRRRTKKTTAPPPRRSPPQPPYAAGITASPDGAANNGLVAGAGASALTKVKKKTGSARLWMRFDRSGRSELVEWEKNAIVHHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPGKSQPKLLGAVEEQEGELLGSNGRQWLPTLETVEGLQSELPFEFQVLEIALEAVCTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLLNQQIEEAQLGATTSNNLPNSARSVRRLGSTRSESLATSHYGEDNDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIDTLVAGAFGMNIPCKLYDIDGIFWPFVWISSAACVLLFLLILAYARWKKLLGS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2145 451 MobiDBLite consensus disorder prediction 1 40 - -
Vra7g2145 451 Pfam CorA-like Mg2+ transporter protein 330 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vra7g2145 451 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 387 439 IPR045863 -
Vra7g2145 451 Gene3D Magnesium transport protein CorA, transmembrane region 145 382 - -
Vra7g2145 451 CDD Mrs2_Mfm1p-like 72 448 IPR039204 -
Vra7g2145 451 Gene3D Magnesium transport protein CorA, transmembrane region 389 449 - -
Vra7g2145 451 Coils Coil 248 282 - -
Vra7g2145 451 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 5 451 - -
Vra7g2145 451 Gene3D - 57 143 - -
Vra7g2145 451 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 451 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2145 Vra-Chr7 41159098 41162368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2145 1 451 MRS2 Gene Family AT3G58970 64.317 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2145 K16075 - gmx:100812561 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2145 7 41159098 41162368 Vra2g1439 2 22483503 22485757 PCT