Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2140 ATGGAGAAATACGAGTTGGTGGAAGAGAACGTAGGGATTGGAAAAGTAGCAGTGGTGAAACTCATGCGTCACAGAGAGACCAAAGAACATGTTGCTGTAAAGTTCATCCCACGGGACCTTACGATTGATGAAACGGTGGCAAGAGAAATCATAAACCATAGATCTCTTCGTCATCCCAATATTGTTCAGTTCAAAGAGGTAGCTCTGACTCCAACACATCTTGCATTAGTTATGGAGTATGCAGCTGGTGGAGAATTGTTTTACCAAGTTCTTTACCAAGGAAGAATCAAAGAAGACAAAGCTAGATATTTCTTCCAGCAGTTGATTGCAGGAGTTAGTTACTGTCACGACATGGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTGTTGGATGGAAGTCCTGCAAATCGTCTTAAAATTTGTGATTTTGGCTATTCTAAGTCAACTCTACTTCATTCGAGGACTCATTCAAGGGTTGGAACTCCAGCCTATATTGCACCAGAGATCATTTCTGGGAAAGATTATGATGGAAAGTTGGCAGATGTTTGGTCCTGTGGAGTAATTCTTTATACAATGCTTGTAGGAACATTGCCATTTGAGGACAAAAGTGATCGTCAAAATCTCAAAAAAATGGTTCAGAGAGTTTGGGCTGTTCAATACGAGTTCCCCGACAATGTTTTAAGCGAAGACAGCAAAAATCTGATATCTCGTATTTTTGTGGCAAATCCATCAAAGAGAATCACCATGAAGGAAATCAAGTCACATCCATGGTTTTTGAAGAACTTGCCTGAGGAGTTAAAAGAAGGGGCTCACTATGTTCACTACAATGAAGAAAATACAAAATATTGTGTTCAAAGTATAGAAGAAATCATGAACATTGTGAACGAAGCAAAAACCAAACCTGTTGCTTGCTCCAAATCTATAGCAGGGTTTGGTAGGAGAATAGAGGAAAATTATATGTATTCATTTTTGTGGATGATGATAAATTAG 996 0.3876 MEKYELVEENVGIGKVAVVKLMRHRETKEHVAVKFIPRDLTIDETVAREIINHRSLRHPNIVQFKEVALTPTHLALVMEYAAGGELFYQVLYQGRIKEDKARYFFQQLIAGVSYCHDMEICHRDLKLENTLLDGSPANRLKICDFGYSKSTLLHSRTHSRVGTPAYIAPEIISGKDYDGKLADVWSCGVILYTMLVGTLPFEDKSDRQNLKKMVQRVWAVQYEFPDNVLSEDSKNLISRIFVANPSKRITMKEIKSHPWFLKNLPEELKEGAHYVHYNEENTKYCVQSIEEIMNIVNEAKTKPVACSKSIAGFGRRIEENYMYSFLWMMIN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2140 331 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Vra7g2140 331 SUPERFAMILY Protein kinase-like (PK-like) 8 288 IPR011009 -
Vra7g2140 331 SMART serkin_6 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2140 331 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 320 - -
Vra7g2140 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Vra7g2140 331 Pfam Protein kinase domain 8 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2140 331 PANTHER SERINE/THREONINE KINASE 2 320 - -
Vra7g2140 331 ProSiteProfiles Protein kinase domain profile. 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2140 331 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2140 Vra-Chr7 41087276 41090790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2140 11 269 CBL-interacting serine-threonine protein kinases AT5G25110 43.657 8.67e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vra7g2140 Pkinase 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2140 K14498 - gmx:100787825 481.485