Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2123 ATGGCCGNAATTTCTTCTTCTGCAATTGACATCTCTGANTTTCCATCCAATCTTAATGTCCTTGTCATTGACACTGATCTCAGAGTTCTTGAATTCATCGAGAAATCATGCAAGGAGGATTCTCATCAAGTTATAATATGCACTGAATCTTCAAGTGCTGTGGATGTTTTGCTGAAAAAAGAAATAGACATTCATTTGATCATCATGGAGCTTCATATGCCAATGATGGATGGCTATGAATTCCTGCAATTTCTCAGTAAAGAAGAAATTGATATTCCTTTTGCCNTGATGTCTGAGGATTTTAGTTCGATTTCCATGACGAAGGCTTTCGATCTTGGAGCTTGCGATTATTTGAAGAAACCCTTCGATGATGACTATTGGTTAAATTTGTGGTCACCTATGTTCAAGCATCATATATTCCTGAGACGCAACAAGAAAAATATTGATAGCTTGGATGATGATAAGATAAGTGAGAAAAGTAATAATTCTNAATTTGAAGTTGAAGCCAATAATACCCTCCACAAGAAAGATTAA 534 0.3539 MAXISSSAIDISXFPSNLNVLVIDTDLRVLEFIEKSCKEDSHQVIICTESSSAVDVLLKKEIDIHLIIMELHMPMMDGYEFLQFLSKEEIDIPFAXMSEDFSSISMTKAFDLGACDYLKKPFDDDYWLNLWSPMFKHHIFLRRNKKNIDSLDDDKISEKSNNSXFEVEANNTLHKKD* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2123 177 Gene3D - 17 154 - -
Vra7g2123 177 SMART REC_2 18 131 IPR001789 GO:0000160
Vra7g2123 177 ProSiteProfiles Response regulatory domain profile. 19 135 IPR001789 GO:0000160
Vra7g2123 177 Pfam Response regulator receiver domain 20 125 IPR001789 GO:0000160
Vra7g2123 177 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 153 IPR045279 GO:0009736
Vra7g2123 177 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 15 153 - -
Vra7g2123 177 SUPERFAMILY CheY-like 16 149 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2123 Vra-Chr7 40913758 40914484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2123 11 142 Response Regulator Gene Family AT1G49190 32.576 1.03e-19 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vra7g2123 Response_reg 5e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2123 - K14491 vra:106769483 180.644