Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2122 ATGGAATTTTTCATGCAATCTCTGTTAATTACCGTGATCACCATGGTTGCATCTCTGTATGTTTTGCTGAAAAGAAGAGCAGGTGGCACTAAAACCTTGCCCCCTGGTAGCTTTGGGTGGCCCCTAATGGGTGAAACCTACCAATTTTTGTCCATCAAGAGTGAACATTTCATTCAAGAGAGGGTCAAAAAGTACTCCTCACAGATCTTCCACACAAACATACTAGGAGAGCCAACAGTGGTTTTTTCTGGTCCTGCTGCAAACAAATTTGTCTCCACCAATGAGACAAAGCTTCTCAAAGTTTGGTACATGAAGACTCAGCGCAGGTTCTTCAATATTCCTGATCAAATTCATGCACCAAACCTCAAACCAAAACAAGAAGCTGCATCTTCTGCTCCAGTGAAGATCTTGGGGATTCTGAAACCTGAGGGAATAGCAAGGTACATGGGGAACAAGGTTGAATTAACCATGCATCAACATTTCATGACACACTGGGAAGGAAAAACAGAAGTGAAGGTGTACCCTTTGGTAAAGGCCTTTACCCTCACACTGGTTTGTCAATTCTTCTTAGGCATTGATGAACCAAAATTGGGAAGTGAGTTTGAGTACTTGTATTTTGGGATCTACTCCGCTCCTGTGAATTTCCCGGGCTCTGCATACCGTAGGGCACTGAAGGCTTCAGCTACAATAAGGAAAGAGATCCAATTTCTGATCAAAGAGAAGATTGATGCTTTGTCCAAGGGGCAAGTTGTGGATGACCTACTAGCACACGTAGTTGGTGCTGAGCAGGGTGGAAAATATGTGCCAAGAATTGAAATAAGCAACATCATCATGGGGTTGATGAATTCCAGCTACATGCCAATAGCTATTACTCTGGCTTTCATGATCAAACATATTGGACAAAGGCCTGATATCTACCAAAAAATCGTATCCGAGCATGCTGGTATTACAAAATTCAAAAGATCTGGTGCAGCACTAGACTGGGACAGCATACAGAAACTGAAATACACATGGGCTGTTGCACAGGAGACTATGAGACTCTATCCAACTGCACCAGGTGTGTTCAGAGAGGTCATAAAAGATATCTCATATGAAGGTTTTACTATTCCAAAAGGGTGGAAGATTTTTTGGTCACTGGTTGGGACAAATAGGGATCCCAACTACTTTCCTGAACCTGAAAGTTTTGACCCCTCAAGGTTTGAAGGAACTATTCTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGACAAGACTACACGCGGTTTGTGGTCCTCAATTTCATTCACATTGTAATAAACAAGTTCAAATGGGAAGTTACAGATCCTGATGAGAAAGTTTCAGGGGGTCTAATACCTACCCTAGCAGAGGGATTATCTATCCGTCTTTATCACCACTAA 1419 0.4278 MEFFMQSLLITVITMVASLYVLLKRRAGGTKTLPPGSFGWPLMGETYQFLSIKSEHFIQERVKKYSSQIFHTNILGEPTVVFSGPAANKFVSTNETKLLKVWYMKTQRRFFNIPDQIHAPNLKPKQEAASSAPVKILGILKPEGIARYMGNKVELTMHQHFMTHWEGKTEVKVYPLVKAFTLTLVCQFFLGIDEPKLGSEFEYLYFGIYSAPVNFPGSAYRRALKASATIRKEIQFLIKEKIDALSKGQVVDDLLAHVVGAEQGGKYVPRIEISNIIMGLMNSSYMPIAITLAFMIKHIGQRPDIYQKIVSEHAGITKFKRSGAALDWDSIQKLKYTWAVAQETMRLYPTAPGVFREVIKDISYEGFTIPKGWKIFWSLVGTNRDPNYFPEPESFDPSRFEGTILPAPYTWIPFGAGPRSCPGQDYTRFVVLNFIHIVINKFKWEVTDPDEKVSGGLIPTLAEGLSIRLYHH* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2122 472 Gene3D Cytochrome P450 24 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PANTHER CYTOCHROME P450 26 15 470 - -
Vra7g2122 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Vra7g2122 472 SUPERFAMILY Cytochrome P450 32 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 15 470 - -
Vra7g2122 472 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 Pfam Cytochrome P450 34 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PRINTS P450 superfamily signature 301 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g2122 472 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2122 Vra-Chr7 40886403 40889463 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2122 32 375 Cytochrome P450 AT5G36110 33.611 8.13e-68 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2122 K20667 - var:108321875 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2122 7 40886403 40889463 Vra7g2122 7 40886403 40889463 ECH