Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2063 ATGTCCAAACCCTGGGGCAACATCGGAGCATGGGCCGCCGATTCCGAGCGAGCCGAGGCCGAGGAGCGCGAGGCCCAGGCTGCGGCCGCGGCCGCCGAGACCCAAAACTTCCCCAGCCTCAAGGAGGCCGTCAGCTCCAAGCCCAAAAAGAAGAAGGGTACAACCATCCCGCTCTCTCAGTTCAACCAAGGCGGTTTTCCCTCCACCGGCGAGCACCAGGGCCTCACACGCGACGAGATGTTGGCGCTTCCCACCGGTCCCAAGGAACGCTCCCCCGAGGAAATGCAGTTCAACCGCCTCGGCGGCGGTTTCTCCTCATACGACCGCTCCGCCGGTCGCTCTCGCGACCGTGACGGCGGAAACAACGACGGCTCCTGGGGCGGAGGCGGGAGAAGATCCTATGGCGGATTCGACGAGGAACGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCTTCCAGGGCTGATGAGGTGGACAATTGGGCCTCCGTGAAGAAATCTGTCCCCGCGTTTGATTCTGGTCGGCAGAATCGCTATGGGGGAGGCGGCGGCGGTTTTGGTGGCGGAGGTGGTGGTTTTGGTGGCGGCGGTGGCGGTGGCGGTGGTTTTGGTGGTGCGTCTAGGGCTGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGGCTGCTCCTGTTAGATCTTCCAATTTTGGTTCAGGTTTTCGTGATTCGGGCGTGGAACCGGATCGTTGGTCGAGAGGTGGTCCGTCGCGTGAGACGGAGCGGACGGAGCGGCCGAGGCTGGTATTGGATCCGCCGAGGGGCGATGGTTCGGTGAATGATGCTTCTGTGAAGGCGACAAACAAGGGCAATCCGTTCGGCGCGGCGAGGCCCAGGGAGGAGGTGTTGGCTGAGAAGGGATTGGACTGGAAGAAGATGGATTCAGAGATTGAGGCGAAGAAGACGAGCCGGCCCACGAGTTCTCACTCCAGCAGGCCTTCCAGTGCTCAGTCCAATCGCTCTGAGGGTCCCGGGTTGCAGGGGGTCGATGCTGTGCCGAAATCGAGGCCCAAGTTGAATCCGTTTGGGGATGCCAAGCCTCGGGAGATTCTGTTGGGTGAGCGAGGCATGGATTGGAGGAAAATTGATCTTGATTTGGAGCATCGCTCTGTTGACAGGCCTGAGACAATGGAGGAAAAATTGTTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAAGAGTCTCCAATAAATTCAAACAAGGAATCTGAGGGTGAAGCTGGTGTAGACCAAACCAGTACATATGCAATATTACAACAGAAAGAAAAGGAGCTGGAAGTTCTTGTCCGTGATTTGGATGATAAAGTACGGTTTGGACAGAAAGCCGTTGAGAGGCCAGGTTCATCAGCAGGAAGATCTTCTGGTTTTTCTGATAGGCCACCTTCTAGATCTGGTTCATTTGAGGATTCTAGAAGCGTAGATTATACAGATAGACCTCGATCTCGTGGTACAGCAGGTACAGGAGATGTGTGGACCCGTCCTAGTGATGACAGAAGACAGTTTCAAGGTAGTCGGGAAAGGGGGTGGTTTTCTGGCAGCAGAGATTTGAATAGGCATTTGGAGCAACAATCATTGAGTACTGGCACAAACTTTTGCCTAATCTGTTATTGCATCTCGAAACATTGTAAATTTCTTTTTCCTCTTTCTGGTAATTTTTTGGGTGTCTGGATGAAGGCAGAAAAAGCCTGTAATTTTATTAGGACTAAATTTTTATCGAGGATTATTGAACTTCCTAGTTAA 1788 0.5358 MSKPWGNIGAWAADSERAEAEEREAQAAAAAAETQNFPSLKEAVSSKPKKKKGTTIPLSQFNQGGFPSTGEHQGLTRDEMLALPTGPKERSPEEMQFNRLGGGFSSYDRSAGRSRDRDGGNNDGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSVPAFDSGRQNRYGGGGGGFGGGGGGFGGGGGGGGGFGGASRADGVDNWAVGKKAAPVRSSNFGSGFRDSGVEPDRWSRGGPSRETERTERPRLVLDPPRGDGSVNDASVKATNKGNPFGAARPREEVLAEKGLDWKKMDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGPGLQGVDAVPKSRPKLNPFGDAKPREILLGERGMDWRKIDLDLEHRSVDRPETMEEKLLKEEIDNLKKELEKESPINSNKESEGEAGVDQTSTYAILQQKEKELEVLVRDLDDKVRFGQKAVERPGSSAGRSSGFSDRPPSRSGSFEDSRSVDYTDRPRSRGTAGTGDVWTRPSDDRRQFQGSRERGWFSGSRDLNRHLEQQSLSTGTNFCLICYCISKHCKFLFPLSGNFLGVWMKAEKACNFIRTKFLSRIIELPS* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2063 595 Coils Coil 431 451 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 240 265 - -
Vra7g2063 595 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 538 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 1 367 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 293 319 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 320 338 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 466 485 - -
Vra7g2063 595 Pfam Plant specific eukaryotic initiation factor 4B 1 524 IPR010433 GO:0003743
Vra7g2063 595 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 538 IPR010433 GO:0003743
Vra7g2063 595 MobiDBLite consensus disorder prediction 417 431 - -
Vra7g2063 595 Coils Coil 13 35 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 52 70 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 456 522 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 134 163 - -
Vra7g2063 595 MobiDBLite consensus disorder prediction 406 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2063 Vra-Chr7 40139469 40145319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2063 1 527 Eukaryotic Initiation Factors Gene Family AT3G26400 57.299 9.23e-149 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2063 - - gmx:100784238 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2063 7 40139469 40145319 Vra7g2063 7 40139469 40145319 ECH