Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2036 ATGCCAGACCCTGGTGGTGGTGAACGTCATTCCGAGGCCAGTTCCGAGACTCTCAATTCTTCCATGCTTGGAAGCTCCATGAGCAGCGAGAGCATTTGCAGCACTAGTTTCAGCCGTCTTTCCTTCGATCTCCTCCCGCCCTCGCCGGAGAGTCTCTCCCTTAAGCCTCATCGCTCCTCCGACTTCGCCTACTCCGCCATTCGCTCCGCCGCCTTCTGCCGCAAGGCCGCTCTCACCTTCCGCGACTTCCACCTCCTCCGTCGCATCGGCTCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGAAACCGGCAATTCAACAGCCCCGTAGAAGACGAGGAGGATGAAGAGTGCTGTTTGTACGCGATGAAGGTGGTGGACAAAGACGCAGTGGCATTGAAAAAGAAGTCGCAGAGAGCGGAAATGGAGAGAAAAATCCTGAAGATGCTGGACCACCCGTTCCTTCCTACTCTCTACGCGGAGTTCGAAGCTTCTCATTTCTCTTGCATCGTGATGGAGTTTTGCTCCGGCGGAGACCTTCACTCGCTGCGCTTCAAGCACCCTCACAACCGTCTCCCTCTCTCCTCCGCTAGATTTTATGCCGCGGAGGTGCTGGTGGCGTTGGAGTACTTACACATGCTGGGAATCATATACAGAGATTTAAAGCCCGAAAACGTGCTGGTGAGATCGGACGGTCACATCATGCTTTCTGATTTCGATCTCTCTCTTTGCTCGGATGCAATCCCAGCCGTTGAATCCTCAGATCCCTTACACAATCCATCGCCAAATGCATTACCTCACACATACACTCAAAGTCACACTCCCCTTCCCACTCGCTCGCATTCTTTTATCAGTCCATTCTCCTGCTTCTCGAACCGGGGTTTCCGGTCTCGTGACATGCGAGTCGTCGAACCGAACCGGCTCTTTGTAGCCGAACCGGTTTCGGCCCGCTCCTGCTCCTTCGTCGGAACCCACGAGTACGTCTCGCCAGAGGTTGCCTCCGGCAGGTCGCACGGTAACGCCGTTGACTGGTGGTCGTTTGGAGTATTTATCTACGAGCTTATATACGGTCGCACGCCGTACGCAGGTCCATCGAAGGAGGCTACGCTACGGAACATCGTGAAGAAGCCCCTGGCGTTCCCCACAGCCACGCCCGCGAGCTGTCTTGAACTCCACGCGCGAGATTTGATATCCGGCTTGCTGAACAAAGACCCAGCGCGTCGACTCGGGTCGAAGCGTGGCGCCGCTGACGTCAAGAAGCACCCCTTCTTCAAAGGGCTGAACCTGGCGCTGATTCGCATGCAGACGCCGCCCCTAGTGCCTGGCTCGAGAAGGACCAAAACGACGTCGCTGTACCCCGTGAAGGAAAGCTTTCTGGAGACACTATGGGAGAATTCTAAATGA 1407 0.5615 MPDPGGGERHSEASSETLNSSMLGSSMSSESICSTSFSRLSFDLLPPSPESLSLKPHRSSDFAYSAIRSAAFCRKAALTFRDFHLLRRIGSGDIGTVYLCRLRNRQFNSPVEDEEDEECCLYAMKVVDKDAVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRFKHPHNRLPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDPLHNPSPNALPHTYTQSHTPLPTRSHSFISPFSCFSNRGFRSRDMRVVEPNRLFVAEPVSARSCSFVGTHEYVSPEVASGRSHGNAVDWWSFGVFIYELIYGRTPYAGPSKEATLRNIVKKPLAFPTATPASCLELHARDLISGLLNKDPARRLGSKRGAADVKKHPFFKGLNLALIRMQTPPLVPGSRRTKTTSLYPVKESFLETLWENSK* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2036 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Vra7g2036 468 Gene3D Transferase(Phosphotransferase) domain 1 176 243 - -
Vra7g2036 468 SUPERFAMILY Protein kinase-like (PK-like) 63 451 IPR011009 -
Vra7g2036 468 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 7 457 - -
Vra7g2036 468 PANTHER FLIPPASE KINASE 1-RELATED 7 457 - -
Vra7g2036 468 MobiDBLite consensus disorder prediction 1 26 - -
Vra7g2036 468 Gene3D Transferase(Phosphotransferase) domain 1 318 443 - -
Vra7g2036 468 Pfam Protein kinase domain 319 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2036 468 Pfam Protein kinase domain 83 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2036 468 SMART serkin_6 83 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2036 468 MobiDBLite consensus disorder prediction 12 26 - -
Vra7g2036 468 ProSiteProfiles Protein kinase domain profile. 83 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g2036 468 Gene3D Phosphorylase Kinase; domain 1 81 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2036 Vra-Chr7 39916936 39919632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2036 25 444 AGC Kinase Gene Family AT2G34650 66.745 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vra7g2036 Pkinase 4e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2036 - - vun:114177159 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2036 7 39916936 39919632 Vra7g2036 7 39916936 39919632 ECH