Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra7g2004 | ATGGATTCAACTCGTGTCTCTCATAGCCTTGGGGATCCCAAAATTCGTCAAGTTGGTTTCTTTGTTCCCGAATCCTCCACCACCGATTCCCACAAGATACTGCCGCCAAGTCATCTTTCCGTTCCGGAGATGCAGAATTCCGTCCATGGCCAAGTGACATCTCGGAGCTATGATCCCTCGGAAAACCGAAACCTTGAAACTGGCATTGAAAAGAGGGAAGATGAAGAGATAGAAGTTATAAAATCAAGTTCAAAGCCGCTGAAAGAAAAAACTACCAAAGCAGAGAGGCGAGCCTTGCAAGAAGCACAGAGAGCTGCTAAAGCTGCTTCTTCTAAAGTTGAGGGAAGTAAGGCTGTTGCTGGGACTGGTAGAGCTGCCTTGGGTAAAAGTACAAAGCAGTCTTCACAAAAGAAAGTTGGTCCTTCTTCTCCAGTGGCTGCTGATAAAAAAGCAGGAGATCGTCCTATAGATAAAGACAGGAAAAAGGATGCTCCTCATCAACGATTGCAATTTGATGATGAAAGCCGAATGGAAAAGGCTAGAAGGCGTGCAGTAGTCAATCCAACTAAATCTAGAACCGGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACATGGGACCAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGATTTAGTGCAACCTTCTGTTTTTGAGGTAGGTCTTCGTTATTCAGCAGGAGAAATATCAGGGGGTAATGCTCGTTGTATAGCAATGCTAAGAGCACTTCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAGGCCCTTGTTAGGAATTTAACAGCAAAAATCAACAGTTCTGTTTCATTCTTTGCTGAATGCAGACCACTTTCAATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTTAACCTGTCTTTAAATTATTCTGAGTTTGAGGCAAAAACAACTCTGTGTTCAGATATTGACCGGTTTATAAATGAAAAAATAGTTCTTGCTGATAAGGTGATTGTCCGACATGCTTTTACAAAGATTAAGGATGGGGATGTGCTTCTCACATATGGATTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTGGGTAAAAAGTTTCGTGTTGTCGTGGTCGATTCCCAGCCAAGGCTAGAAGGTCGGGCCTTGCTTCGTAGGCTAGTGGCTAAGGGTCTAAGTTGCACATATACTCATATAAATGCTGTTTCTTATATCATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGACCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGGTGTCAATTATCTGGATAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTGTCTGTCATTGTAACAGATTATGGCATGCTTCCTCCTACAAGCGTGCCTGTAATAGTTCGTGAATATCGACAGCATTTGTTGATGTAG | 1644 | 0.4173 | MDSTRVSHSLGDPKIRQVGFFVPESSTTDSHKILPPSHLSVPEMQNSVHGQVTSRSYDPSENRNLETGIEKREDEEIEVIKSSSKPLKEKTTKAERRALQEAQRAAKAASSKVEGSKAVAGTGRAALGKSTKQSSQKKVGPSSPVAADKKAGDRPIDKDRKKDAPHQRLQFDDESRMEKARRRAVVNPTKSRTGVELFQHLPQYEHGTKLSNLESKFFHLDLVQPSVFEVGLRYSAGEISGGNARCIAMLRALQDAIRDYCTDHEKALVRNLTAKINSSVSFFAECRPLSMSMGNAIRFVKSRIVNLSLNYSEFEAKTTLCSDIDRFINEKIVLADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKKFRVVVVDSQPRLEGRALLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFHERVLLDSICSNELGDPDAIARVPGRMGVNYLDNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYRQHLLM* | 548 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra7g2004 | 547 | MobiDBLite | consensus disorder prediction | 127 | 141 | - | - | |
Vra7g2004 | 547 | Gene3D | - | 335 | 541 | IPR042529 | - | |
Vra7g2004 | 547 | MobiDBLite | consensus disorder prediction | 37 | 188 | - | - | |
Vra7g2004 | 547 | Pfam | Initiation factor 2 subunit family | 239 | 531 | IPR000649 | GO:0044237 | |
Vra7g2004 | 547 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 1 | 55 | - | - | |
Vra7g2004 | 547 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B | 66 | 546 | - | - | |
Vra7g2004 | 547 | MobiDBLite | consensus disorder prediction | 64 | 102 | - | - | |
Vra7g2004 | 547 | MobiDBLite | consensus disorder prediction | 37 | 63 | - | - | |
Vra7g2004 | 547 | MobiDBLite | consensus disorder prediction | 150 | 185 | - | - | |
Vra7g2004 | 547 | PANTHER | NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN | 1 | 55 | - | - | |
Vra7g2004 | 547 | PANTHER | NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN | 66 | 546 | - | - | |
Vra7g2004 | 547 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 224 | 541 | IPR037171 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra7g2004 | Vra-Chr7 | 39517093 | 39521307 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra7g2004 | 77 | 547 | Eukaryotic Initiation Factors Gene Family | AT5G38640 | 66.457 | 0.0 | 642 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra7g2004 | K03680 | - | gmx:100795256 | 847.04 |