Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2004 ATGGATTCAACTCGTGTCTCTCATAGCCTTGGGGATCCCAAAATTCGTCAAGTTGGTTTCTTTGTTCCCGAATCCTCCACCACCGATTCCCACAAGATACTGCCGCCAAGTCATCTTTCCGTTCCGGAGATGCAGAATTCCGTCCATGGCCAAGTGACATCTCGGAGCTATGATCCCTCGGAAAACCGAAACCTTGAAACTGGCATTGAAAAGAGGGAAGATGAAGAGATAGAAGTTATAAAATCAAGTTCAAAGCCGCTGAAAGAAAAAACTACCAAAGCAGAGAGGCGAGCCTTGCAAGAAGCACAGAGAGCTGCTAAAGCTGCTTCTTCTAAAGTTGAGGGAAGTAAGGCTGTTGCTGGGACTGGTAGAGCTGCCTTGGGTAAAAGTACAAAGCAGTCTTCACAAAAGAAAGTTGGTCCTTCTTCTCCAGTGGCTGCTGATAAAAAAGCAGGAGATCGTCCTATAGATAAAGACAGGAAAAAGGATGCTCCTCATCAACGATTGCAATTTGATGATGAAAGCCGAATGGAAAAGGCTAGAAGGCGTGCAGTAGTCAATCCAACTAAATCTAGAACCGGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACATGGGACCAAGCTTTCTAATCTTGAATCAAAGTTTTTCCACCTTGATTTAGTGCAACCTTCTGTTTTTGAGGTAGGTCTTCGTTATTCAGCAGGAGAAATATCAGGGGGTAATGCTCGTTGTATAGCAATGCTAAGAGCACTTCAAGATGCCATTAGAGATTACTGCACAGATCATGAAAAGGCCCTTGTTAGGAATTTAACAGCAAAAATCAACAGTTCTGTTTCATTCTTTGCTGAATGCAGACCACTTTCAATGAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGTTAACCTGTCTTTAAATTATTCTGAGTTTGAGGCAAAAACAACTCTGTGTTCAGATATTGACCGGTTTATAAATGAAAAAATAGTTCTTGCTGATAAGGTGATTGTCCGACATGCTTTTACAAAGATTAAGGATGGGGATGTGCTTCTCACATATGGATTGTCATGTGTTGTTGAGATGATTCTTTTATATGCCCATGAACTGGGTAAAAAGTTTCGTGTTGTCGTGGTCGATTCCCAGCCAAGGCTAGAAGGTCGGGCCTTGCTTCGTAGGCTAGTGGCTAAGGGTCTAAGTTGCACATATACTCATATAAATGCTGTTTCTTATATCATGCATGAGGTCACACGAGTTCTTCTGGGAGCTTCTGCAGTTTTGTCTAATGGAACTGTATATTCAAGGGTTGGGACTTCTTGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCTACTGGATTCAATATGTTCTAACGAACTAGGTGACCCAGATGCTATTGCCAGGGTTCCTGGACGAATGGGTGTCAATTATCTGGATAATTGGGCCAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTGTCTGTCATTGTAACAGATTATGGCATGCTTCCTCCTACAAGCGTGCCTGTAATAGTTCGTGAATATCGACAGCATTTGTTGATGTAG 1644 0.4173 MDSTRVSHSLGDPKIRQVGFFVPESSTTDSHKILPPSHLSVPEMQNSVHGQVTSRSYDPSENRNLETGIEKREDEEIEVIKSSSKPLKEKTTKAERRALQEAQRAAKAASSKVEGSKAVAGTGRAALGKSTKQSSQKKVGPSSPVAADKKAGDRPIDKDRKKDAPHQRLQFDDESRMEKARRRAVVNPTKSRTGVELFQHLPQYEHGTKLSNLESKFFHLDLVQPSVFEVGLRYSAGEISGGNARCIAMLRALQDAIRDYCTDHEKALVRNLTAKINSSVSFFAECRPLSMSMGNAIRFVKSRIVNLSLNYSEFEAKTTLCSDIDRFINEKIVLADKVIVRHAFTKIKDGDVLLTYGLSCVVEMILLYAHELGKKFRVVVVDSQPRLEGRALLRRLVAKGLSCTYTHINAVSYIMHEVTRVLLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFHERVLLDSICSNELGDPDAIARVPGRMGVNYLDNWASEDNLRLLNLMYDATPSDYVSVIVTDYGMLPPTSVPVIVREYRQHLLM* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2004 547 MobiDBLite consensus disorder prediction 127 141 - -
Vra7g2004 547 Gene3D - 335 541 IPR042529 -
Vra7g2004 547 MobiDBLite consensus disorder prediction 37 188 - -
Vra7g2004 547 Pfam Initiation factor 2 subunit family 239 531 IPR000649 GO:0044237
Vra7g2004 547 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 55 - -
Vra7g2004 547 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 66 546 - -
Vra7g2004 547 MobiDBLite consensus disorder prediction 64 102 - -
Vra7g2004 547 MobiDBLite consensus disorder prediction 37 63 - -
Vra7g2004 547 MobiDBLite consensus disorder prediction 150 185 - -
Vra7g2004 547 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 55 - -
Vra7g2004 547 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 66 546 - -
Vra7g2004 547 SUPERFAMILY NagB/RpiA/CoA transferase-like 224 541 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2004 Vra-Chr7 39517093 39521307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2004 77 547 Eukaryotic Initiation Factors Gene Family AT5G38640 66.457 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2004 K03680 - gmx:100795256 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2004 7 39517093 39521307 Vra7g2004 7 39517093 39521307 ECH