Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1994 ATGGCTGTTTCCTTCAAAGCCTCATACCCACTTTTCCTTTGCTTGATTCTTTTCTATGGCGTCAATTGCGCTGAGTTTGAAGTTGGAGGCCATGGAGGTTGGGTTGTCCCAAAGACAAAGGATGATGCTCAAATGTTCAATCAATGGGCATCCCAAAACAGATTCAGGATTGATGACAATCTTCTTTTCAAGTACGAGAAAGACTCAGTTATGGAGGTGACTGAAGAAGAATATGAAAAATGTGTATCACCTCATCCCCTCTTTTTCTCCAACAATGGTGACACTGTGTTCAAGTTTGACAGACCAGGCTTGTTCTACTTCATCAGTGGTGTTCGTGGTCACTGTGACAGAGGGCAGAAGATGATCATCAAGGTCTTGGATATTGAAGCAAGTCCCTCACCCCAATATGCAAATGGCACTGCACCAAAGCCACATTCAAAAAGTGGAGTTGCTGAACTTACTCCTATGAGGATCATGACAGAGTCCACAGTTTTTGTTATGTCAACCTTCTTCCTTCAGCTTTATGTTTGA 531 0.4275 MAVSFKASYPLFLCLILFYGVNCAEFEVGGHGGWVVPKTKDDAQMFNQWASQNRFRIDDNLLFKYEKDSVMEVTEEEYEKCVSPHPLFFSNNGDTVFKFDRPGLFYFISGVRGHCDRGQKMIIKVLDIEASPSPQYANGTAPKPHSKSGVAELTPMRIMTESTVFVMSTFFLQLYV* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1994 176 CDD OsENODL1_like 24 126 IPR041846 -
Vra7g1994 176 SUPERFAMILY Cupredoxins 24 126 IPR008972 -
Vra7g1994 176 ProSiteProfiles Phytocyanin domain profile. 24 127 IPR003245 GO:0009055
Vra7g1994 176 PANTHER BLUE COPPER PROTEIN 10 151 IPR039391 GO:0009055
Vra7g1994 176 Pfam Plastocyanin-like domain 44 119 IPR003245 GO:0009055
Vra7g1994 176 Gene3D - 23 130 IPR008972 -
Vra7g1994 176 PANTHER EARLY NODULIN-LIKE PROTEIN 6 10 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1994 Vra-Chr7 39458364 39459466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1994 10 129 Phytocyanin Superfamily AT1G48940 57.500 2.84e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1994 - - var:108327897 342.813