Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1986 ATGGCTGGGGGTAGAAGGAGGAGGCATCACTTCGGCAGAATCCATGCATTCACGTGTGGGAAAGCTTCCATGAAGGAAGAACATTCACTGATTGGAGGCCCTGGGTTCTCAAGGAAAGTCCATTGCAATGACCCTGAACGTGCCACCGCGAGTCTTCTCAATTATGGAGACAATTATGTCAGAACAACTAAGTATACATTGGCCACGTTCCTCCCCAAGTCCTTGTTTGAGCAGTTCAGGAGGGTTGCAAATTTCTACTTCCTCGTTTGTGCAGTTTTGTCTTTCTTTCCGGTGTCTCCTTACTCTGGAGTCAGTAATGTTGTCCCTCTACTGGTTGTGGTAGCTGCCACAATGGCCAAAGAGTTCGTTGAAGATTTTAGACGAAAACAACAGGATATAGAGATAAATAACAGAAAAGTTAAAGTGCATGGTGGAGGTAGTGATTTTGCCTATTCTAAATGGAGGGATTTGAAAGTTGGAGATATAGTGAGAGTGGAAAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTGCGTCAAATTATGATGATGCAATTTGCTATGTCGAGACTATGAATCTTGATGGAGAGACAAATCTGAAACTGAAACAAGCATTGGAAGAAACTTCAAAGTTGCAAGAAGATTCGAGCTTTCAAAATTTCAGGGCTGTCATCACATGTGAAGATCCAAATGCAAATTTGTACGCATTTGTTGGAAGCATGGAGTTTGGGGATCAACAGTATCCTCTTGCACCTCAACAGCTACTTCTCAGGGACTCTAAGCTGAGGAACACAGATTTTGTTTATGGTGTGGTAATCTTTACTGGACATGATACAAAGGTTATGCAGAATGCAACAGACCCGCCATCCAAGAGAAGCAAAATTGAGAAAAGGATGGATAAAATTATCTACTGCCTCTTCTTTCTACTTATTTTGATTTCTTTCATTGGGTCCATATTCTTTGGGATTACAACAAATGATGACATTGAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGATGATACCGAAATTTTCTATGACCCTAATGAACCGGTAGCTGCTGCAATTCTGCATTTCTTGACAGCACTTATGTTGTACAGTTACTTGATTCCGATTTCCTTGTATGTATCCATTGAAATTGTGAAGGTTCTTCAAAGCATTTTCATCAACCAGGATGCGAATATGTATTATGCGGAAACTGACAAGCCAGCACATGCTCGTACATCAAATTTGAATGAAGAACTTGGCCAAGTAGATACCATACTTTCAGATAAGACAGGAACTTTGACTTGTAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGCCGAGGAGTTACAGAAGTTGAGAGAGCTCTATCTATGAGACATGAATCAGATTCGGGTAAAGAGTTGAAAGAAAACAACAACAGTGCAATGGTTCGTGAATCAAAGCCATCCATTAAAGGGTTTAACTTTATGGATGAAAGGATCATGAATGGAAATTGGATCAAAGAACCCAATTCCAATGTAATCCAGAATTTCTTAAGGCTTCTCGCTGTATGCCACACTGCAATACCAGAAGTTGATGAAGTAACTGGGAAGGTTTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCGGCCAGGGAACTTGGATTTGAATTTTATGAAAGGACACATACAGCTATTTCACTGCATGAATTAGACCCCATAACAGGCCTGAAAGTTGAAAGGTCCTACAAACTTCTGAACGTATTAGAGTTTAGTAGTGCAAGAAAACGGATGTCTGTAATTGTAAGAGATGAGGAGGGGAAACTGTTGCTTCTCAGCAAAGGCGCTGACAGTGTAATGTTTGAACGAATTGCAAAGAATGGAAGGCAATTTGAAGAGAACACAAAGCAGCACCTCAGTGAATATGCTGATTCTGGTTTGAGGACCTTGATACTTGCATATCGTGAACTTAATGAGGAAGAGTACTATCAATTTAATAAAGAGTTCACAGAGGCCAAGAACTTAGTGAGTGCAGACCAGGAGCAGCTTGTTGAGAGCATAATACAAAATATTGAGAAGGATTTAATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTACAAGATGGGGTTCCTGAATGCATTGATAAGCTAGCACAGGCTGGGATTAAGCTATGGGTTTTAACTGGTGATAAAATGGAGACAGCAATTAATATAGGATTTGCTTGTAGCTTACTCAGACAAGGAATGAAACAAATTATAATTAGCTCAGATACTCCAGAAATCAAATCATTGGAGAAAATGGAGGACAAGGCTGCTGCTGATGCGGCAATTAAGTCAAGTGTTATTCGTCAACTAAGGGAGGCAAAATCCTTACTTTCTTCATCAGATGAAAGCTATGAGGCCTTAGCCTTGATCATTGATGGGAAGTCTCTTACATATGCACTGGAAGATGATGTAAATGATTTGTTTCTTGGACTTGCCATTGGCTGCGCATCTGTTATCTGCTGTCGTTCCTCTCCCAAGCAGAAAGCACTTGTTACAAGACTTGTGAAGATGAGAACTGGTAGTACAACACTAGCTATTGGAGATGGGGCAAATGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGTATTAGTGGTGTGGAAGGCATGCAGGCAGTTATGTCAAGTGACATTGCAATAGCCCAATTTCGGTTTCTTGAGCGGTTGCTTCTTGTGCACGGACATTGGTGTTACAGAAGGATATCATCAATGATCTGCTACTTCTTTTACAAGAATATTACCTTCGGCTTCACTCTGTTCTTCTTTGAGATATATGCCTCATTCTCCGGCCAGGCTGCATACAATGATTGGTTCATGTCACTATATAATGTCTTCTTCACTTCACTTCCTGTAATTGCATTGGGAGTGTTTGATCAGGATGTCTCTTCCAAACTATGTCTCAAGTTTCCATTATTATACCAAGAAGGCATCCAAAACATTCTATTCAGCTGGAAAAGGATCATCGGTTGGATAATTAATGGAGTTGTGACTTCTGCCATCATATTCTTCTTCTGCATCCGTACCATGGAACATCAGGCATTCCGCAAAGGGGGTGAAGTGGTGGAGCTGGAAGTTCTTGGTGCCACCATGTACACCTGTGTTGTGTGGGTGGTGAATTGTCAAATGGCATTATCTATCAGTTACTTCACTTATGTACAGCATATATTCATCTGGGGAAGCATCATATTCTGGTATATATTCCTCATGGCATATGGAGCCATAGACCCTTCCTTCTCCACCACTGCCTATAAGGTCTTCGTTGAAGCTCTTGCACCAGCACCATATTTCTGGATCATCACTTTGCTCATTCTCATTGCTTCCCTTCTTCCATATTTCGTCTATGCTTCCATCCAAATGCGTTTCTTCCCCATGTACCATCAAATGATTCAGTGGATAAGGAAGGACGGCCAAACGAGTGATCCAGAATACTGCAATGTGGTAAGGCAGCGATCGATAAGAAACACCACAGTTGGATTCACAGCTCGTTTGGAAGCATCCAAACGTTTTAATGCATCCAGAAGAGTTGAATCAAGCACAAAACCTGAAACAACATCCATAATATTTGAATCATCCAAACGTTCTGAAGGGCAGTCTGATGACCGATAA 3657 0.4091 MAGGRRRRHHFGRIHAFTCGKASMKEEHSLIGGPGFSRKVHCNDPERATASLLNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSGVSNVVPLLVVVAATMAKEFVEDFRRKQQDIEINNRKVKVHGGGSDFAYSKWRDLKVGDIVRVEKDEFFPADLILLASNYDDAICYVETMNLDGETNLKLKQALEETSKLQEDSSFQNFRAVITCEDPNANLYAFVGSMEFGDQQYPLAPQQLLLRDSKLRNTDFVYGVVIFTGHDTKVMQNATDPPSKRSKIEKRMDKIIYCLFFLLILISFIGSIFFGITTNDDIENGRMKRWYLRPDDTEIFYDPNEPVAAAILHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDANMYYAETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALSMRHESDSGKELKENNNSAMVRESKPSIKGFNFMDERIMNGNWIKEPNSNVIQNFLRLLAVCHTAIPEVDEVTGKVSYEAESPDEAAFVIAARELGFEFYERTHTAISLHELDPITGLKVERSYKLLNVLEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERIAKNGRQFEENTKQHLSEYADSGLRTLILAYRELNEEEYYQFNKEFTEAKNLVSADQEQLVESIIQNIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLEKMEDKAAADAAIKSSVIRQLREAKSLLSSSDESYEALALIIDGKSLTYALEDDVNDLFLGLAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFFEIYASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGIQNILFSWKRIIGWIINGVVTSAIIFFFCIRTMEHQAFRKGGEVVELEVLGATMYTCVVWVVNCQMALSISYFTYVQHIFIWGSIIFWYIFLMAYGAIDPSFSTTAYKVFVEALAPAPYFWIITLLILIASLLPYFVYASIQMRFFPMYHQMIQWIRKDGQTSDPEYCNVVRQRSIRNTTVGFTARLEASKRFNASRRVESSTKPETTSIIFESSKRSEGQSDDR* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1986 1218 Pfam Cation transport ATPase (P-type) 532 623 - -
Vra7g1986 1218 Gene3D - 537 677 IPR023299 GO:0000166
Vra7g1986 1218 SFLD C1.7: P-type atpase like 406 913 - -
Vra7g1986 1218 MobiDBLite consensus disorder prediction 1190 1218 - -
Vra7g1986 1218 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Vra7g1986 1218 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Vra7g1986 1218 MobiDBLite consensus disorder prediction 1193 1209 - -
Vra7g1986 1218 SUPERFAMILY HAD-like 419 917 IPR036412 -
Vra7g1986 1218 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 488 700 IPR023299 GO:0000166
Vra7g1986 1218 SFLD p-type atpase 406 913 IPR044492 -
Vra7g1986 1218 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Vra7g1986 1218 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Vra7g1986 1218 PRINTS P-type cation-transporting ATPase superfamily signature 748 758 - -
Vra7g1986 1218 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Vra7g1986 1218 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1185 - -
Vra7g1986 1218 Gene3D - 694 902 IPR023214 -
Vra7g1986 1218 Gene3D - 114 286 - -
Vra7g1986 1218 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Vra7g1986 1218 SUPERFAMILY Calcium ATPase, transduction domain A 147 285 IPR008250 -
Vra7g1986 1218 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 1140 IPR023298 -
Vra7g1986 1218 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Vra7g1986 1218 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
Vra7g1986 1218 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 359 446 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vra7g1986 1218 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1986 Vra-Chr7 39371306 39377442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1986 10 1188 Primary Pumps ATPases AT3G25610 70.364 0.0 1777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1986 7 39371306 39377442 Vra7g1986 7 39371306 39377442 ECH