Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1982 ATGGAGATTTCTGCCATGGCTTCTTCAGCTACTCCAAGACCTTCTCTTCCAACTCCTTCTCCACACCCAGTAGTCACCACTTTTACCAAACCTCAACTCAGACGCAACCACATAGCATTGCCAACCTCATCCACCATTTCGCTCCTCGCTCTCTTCGCCCCTCCCAACGAAGCCAAAGCCGCTGTCTCCATCGCCAAGGACCAGATTGTTTCGTCTCTCACCCAAGTTGAGAAAACGATTGACCAGGTTCAGGAAGTGGGTTCGAGTGTTCTGGACACGGCACAGCGTGTTGCTGAGGTAATTGGGAACGCTTTGAAGCCTGGCATCGAAACGGCGTTGCCGATTGTGCAGCAAGCTGGGGAAGAGGCCTTGAAAATTGCTTCCCCTGCCATTTCTGAAGCTTCCAAGAAAGCCCAAGAAGCGCTGCAAAGCTCTGGTGTTGATACCCAACCTGTTATCACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACGACCAAGGTGATTGATGTTGCCAAGCCAATAGCTTCTTCAACCGTTGAAACCATATCCTCTTCAGACCCTACTGTGATTGCTGGAACTGCAGGAGCACTATTTGTTGCCTACCTCCTGATTCCTCCTATCTGGTCTGTCATCTCCTCTAATCTTCGTGGTTACAAAGGAGACCTAACTCCTGCTCAAGCCCTTGATTTGATATCTGCACAAAACTACGTTTTGATTGATATCAGGTCAGAGAAAGATAAGGACAAGACTGGTATCCCTCGCCTTCCCTCTAGTGCTAAAAACAGGCTGGTTGCCATTCCTTTGGAAGAACTGCCAAGTAAGCTGAAAGGGCAGGTGAAGAATGCGAAGAAGTTGGAAGCTGAGATAGTGGCTTTGAAGATTTCTTATCTGAAGAAAATCAACAAAGGCAGCAACGTTGTGATCCTGGACTCGTATTCGGACGTAGCAAAAACAGTGGGAAGAACACTGACTAGCATTGGTTTTAAGAAGACATGGATCGTTGCTGGTGGATTCTCTGGGAACAAAGGGTGGTTGCAGAGTAGATTAGGAACAGATTCTTATAACTTTTCGTTGGCAGAGGTGCTGTCACCATCCAGGATCATCCCTGCATCTGTGAGAGCTTTTGGCACAACTAGCCAATCTAGCACTAAGCTTCTTCCCGGGGCTGACTAA 1179 0.4809 MEISAMASSATPRPSLPTPSPHPVVTTFTKPQLRRNHIALPTSSTISLLALFAPPNEAKAAVSIAKDQIVSSLTQVEKTIDQVQEVGSSVLDTAQRVAEVIGNALKPGIETALPIVQQAGEEALKIASPAISEASKKAQEALQSSGVDTQPVITAAKTVADAAQQTTKVIDVAKPIASSTVETISSSDPTVIAGTAGALFVAYLLIPPIWSVISSNLRGYKGDLTPAQALDLISAQNYVLIDIRSEKDKDKTGIPRLPSSAKNRLVAIPLEELPSKLKGQVKNAKKLEAEIVALKISYLKKINKGSNVVILDSYSDVAKTVGRTLTSIGFKKTWIVAGGFSGNKGWLQSRLGTDSYNFSLAEVLSPSRIIPASVRAFGTTSQSSTKLLPGAD* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1982 392 SMART rhod_4 224 352 IPR001763 -
Vra7g1982 392 CDD RHOD 228 342 - -
Vra7g1982 392 Pfam Rhodanese-like domain 225 342 IPR001763 -
Vra7g1982 392 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 6 390 IPR044690 GO:0009704|GO:0071277|GO:0090333
Vra7g1982 392 Gene3D - 221 360 IPR036873 -
Vra7g1982 392 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 6 390 - -
Vra7g1982 392 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 200 342 IPR036873 -
Vra7g1982 392 MobiDBLite consensus disorder prediction 1 23 - -
Vra7g1982 392 ProSiteProfiles Rhodanese domain profile. 234 355 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1982 Vra-Chr7 39345554 39347750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1982 5 313 Sulfurtransferasese or Rhodanese AT5G23060 68.065 6.87e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1982 - - gmx:100813363 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1982 7 39345554 39347750 Vra7g1982 7 39345554 39347750 ECH