Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1975 ATGGGGTGCTCATTCTCCGGTTTGAACGCGCTGTACGATTCCGTTAACAGCGGAGGCGATGCGTGGATCAACGAGAATCGTTTCCGCATCGTGCGCCAGCTCGGAGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGCTTATCAACGACTCCGCTGCCGGTGGCCTTGCCAAGAAGCTCAAAGACTCCTCTCATGTCTCCGAGGATGGGACTTACGCTATGAAAAAGGTCCTCATTCAGAACAATGAACAGCTGGAGTTGGTCAGGGAGGAGATCCGTGTTTCGTCACTGTTCAATCATCCCAATCTGCTCCCACTTCTTGATCATGCAATCATCTCTGTTAAGCCTACCCAAGAAACGTCTTGGAACCATGAAGCATACTTGCTGTTTCCAGTTCATATGGATGGAACATTGCTAGACAATGCCAAAGTAATGAAAACCAAGAAGGAATTCTATTCCACCTCAGATGTTCTTCAAATATTTCGTCAGGAATGGGCAGCTGAACACTGCTCTGCACCTTTCCGAGCTCCTGAGCTGTGGGATTGTCCAAGCCAAGCTGCTATAGATGAGAGGACTGACGTTTGGTCTCTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCATTTGAATATGCACTGGGAGAGTCTGGTGGAAGCCTGCAATTGGCTATCGTAAATGCTCAGGTGAAATGGCCAGCTGGACCTAAGCCTCCATATCCAGAAGCTTTTCACCAGTTCGTGTCATGGATGCTTCAGCCCCAGGCTGCTATGAGGCCCCGAATAGATGATATCATCATCCATGTGGATAAGTTGATTGCAAAGTTCTCCCAATGA 843 0.484 MGCSFSGLNALYDSVNSGGDAWINENRFRIVRQLGEGGFAYVYLVKELINDSAAGGLAKKLKDSSHVSEDGTYAMKKVLIQNNEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHMDGTLLDNAKVMKTKKEFYSTSDVLQIFRQEWAAEHCSAPFRAPELWDCPSQAAIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGPKPPYPEAFHQFVSWMLQPQAAMRPRIDDIIIHVDKLIAKFSQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1975 280 SMART serkin_6 28 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1975 280 ProSitePatterns Protein kinases ATP-binding region signature. 34 60 IPR017441 GO:0005524
Vra7g1975 280 Gene3D Phosphorylase Kinase; domain 1 12 132 - -
Vra7g1975 280 Gene3D Transferase(Phosphotransferase) domain 1 139 280 - -
Vra7g1975 280 SUPERFAMILY Protein kinase-like (PK-like) 18 270 IPR011009 -
Vra7g1975 280 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 164 279 - -
Vra7g1975 280 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 164 - -
Vra7g1975 280 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1975 280 PANTHER - 164 279 - -
Vra7g1975 280 PANTHER - 1 164 - -
Vra7g1975 280 Pfam Protein kinase domain 170 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Vra7g1975 Pkinase 8.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1975 K08856 - sspl:121762867 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1975 7 39263948 39271453 Vra7g1975 7 39263948 39271453 ECH