Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1972 ATGATTCAGCTCTCTTGTGCCGTTCTGAGTCACCGGCATATTGGAGGAAGTCTCCGGCAGATTGGAGGATCTCTGGAAGTAAAGAAGAAAAGGATGTTCTCCAACAGAGAATCTGCTCGCAGGTCTCGCATGCGAAAGAAACAACAAATTGAAGTCCTTCAGTATCACGTGGATCATCTGCAGACACTAAACCATCAACTCTCCCAAAAGATCATTTACTTGCTTGAATGTAACCAACAAATCCACCAACAGAATTCTCAGCTAAAAGAAAAAGTTTCCTCTCTTCAGGTAGTACTCTCTGACTTGTTGGTTCCTGCAGCAGGTGCAGAACAACCTCACCACATCCCTAATGGCTTCCCAGCCGAGCCTTCTTCAACTAGACCAATTGCAAGTTCCCGAACATAG 405 0.4519 MIQLSCAVLSHRHIGGSLRQIGGSLEVKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQIHQQNSQLKEKVSSLQVVLSDLLVPAAGAEQPHHIPNGFPAEPSSTRPIASSRT* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1972 134 MobiDBLite consensus disorder prediction 109 134 - -
Vra7g1972 134 CDD bZIP_plant_GBF1 28 76 IPR045314 GO:0003700|GO:0006355
Vra7g1972 134 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 26 125 IPR044521 -
Vra7g1972 134 Pfam bZIP transcription factor 28 85 IPR004827 GO:0003700|GO:0006355
Vra7g1972 134 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 25 88 IPR004827 GO:0003700|GO:0006355
Vra7g1972 134 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 26 125 - -
Vra7g1972 134 Gene3D - 26 101 - -
Vra7g1972 134 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 30 45 IPR004827 GO:0003700|GO:0006355
Vra7g1972 134 SMART brlzneu 22 87 IPR004827 GO:0003700|GO:0006355
Vra7g1972 134 SUPERFAMILY Leucine zipper domain 28 78 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1972 Vra-Chr7 39214969 39218500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1972 26 132 bZIP Transcription Factor Family AT5G60830 53.571 5.23e-30 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra7g1972 bZIP_1 6.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1972 - - aprc:113874797 187.963