Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1958 ATGGAGTCTGTGTGGTTCTCCACCACTGGATCTGCTGACCCCCGTGGTGGCTTCTTGGCTGTCTTACTGCTGTCACTGCTCTTGTGCTCAACATTCTCTTCTACGGAAGCCTATGATGCACTTGATCCAACTGGCAACATTACAATCAAATGGGATGTCATAAGCTGGACACCAGACGGCTATATTGCTGTAGTTACAATGTACAACTTTCAACAGTATCGGCATATTCAGGCTCCTGGATGGATACTAGGGTGGACATGGGCAAAGAAGGAAGTAATTTGGAATGTAGTGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAACATTCCTCATTGTTGTAAGAAAGATCCAACCGTCGTGGATTTACTGCCTGGAACTCCTTACAACCAGCAGATTGCCAATTGTTGCACTGGGGGAGTCCTAACTTCATGGGCCCAGGACCCTGAACATGCTATAAGCTCATTTCAACTCAGTGTTGGTTCTGCAGGAACAACTAACAAAACGGTCAAACTGCCAAGAAATTTTACCCTTAAAGCACCAGGGCCTGGTTATACTTGTGGACCTGCAAAGATTGTGAAACCAACTAAATTTATTACCAAAGACAAGAGGAGAACCACTCAAGCATTGATGACCTGGAATGTTACGTGCACGTATTCTCAATTCCTAGCTCAGAAGACTCCAACGTGTTGTGTTTCTCTTTCATCCTTCTACAACAGTACAATAGTAAACTGCCCTACCTGCACTTGTGGTTGCCAAAACAAAACAGAACCTGGAAGCTGTGTAGATCCTAATTCCCCACATTTAGCTTCAGTTGTATCACCCCCAGGCAAAGCTATAAATACACCTCTGGTCCGATGCACCAATCACATGTGTCCTATTCGAGTGCATTGGCACGTGAAACTTCAATATAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTACATGGTGAACTATTCACAATGGAACCTTGTTGTCCAGCACCCAAACTTTGACAATGTAACTCAGGTTTTCAGCTTTAACTACAAGCCGATAACACCTTATGTGGGCTTAAATGATACTGGTATGCTGTGGGGAGTCAAGTTCTACAATGATTTACTTACTTCAGCAGGACCCCTTGGGAATGTGCAGTCTGAGCTCTTATTCCGAAAGGACAAATCAACCTTCACATTTGATAAGGGATGGGCTTTCCCTCGAAGAATTTATTTCAACGGAGATAACTGTGTAATGCCACCTCCTGACGCCTATCCATGGCTGCCAAATGCAAGTTCAAGACTAGTTTTCTCTTTACTAAGCACAGTTTTTGGCACTTTATACTATGTGGTAATGTTATTGACTTAA 1365 0.4359 MESVWFSTTGSADPRGGFLAVLLLSLLLCSTFSSTEAYDALDPTGNITIKWDVISWTPDGYIAVVTMYNFQQYRHIQAPGWILGWTWAKKEVIWNVVGGQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCTGGVLTSWAQDPEHAISSFQLSVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNSTIVNCPTCTCGCQNKTEPGSCVDPNSPHLASVVSPPGKAINTPLVRCTNHMCPIRVHWHVKLQYKEYWRIKITITNFNYMVNYSQWNLVVQHPNFDNVTQVFSFNYKPITPYVGLNDTGMLWGVKFYNDLLTSAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRLVFSLLSTVFGTLYYVVMLLT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1958 454 PIRSF COBRA 15 454 IPR006918 GO:0010215|GO:0031225
Vra7g1958 454 PANTHER PROTEIN COBRA 13 446 IPR006918 GO:0010215|GO:0031225
Vra7g1958 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0031225
Vra7g1958 454 PANTHER COBRA-LIKE PROTEIN 13 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1958 Vra-Chr7 39052398 39056493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1958 19 451 COBRA Gene Family AT3G02210 73.272 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1958 - - vun:114177145 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1958 7 39052398 39056493 Vra7g1958 7 39052398 39056493 ECH
Vra7g1958 7 39052398 39056493 Vra2g1602 2 24010712 24014209 PCT