Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1952 ATGGCAGCAAAGTTCTTGCATTCTTTAGCAGATGACAACCCAGATTTAAAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCATCACATTATTTCCTCTCCCCACATTACCCAGAAGAGGCTTCATCCAGGTTATTCCCTCTTCAATTATGACAGTCTGGAAAGAGGTTCTAATATCATACACCAGACGCAACCAACAGCTGATATGAGGGGTATGAGTGATAAGCAGAAAATTTCAGCTGAATCATCGAGAACCTCATTCTCTTCGTCTTGTTCATCATCCATGTCCTCTTTGGACTATAAAGCTGAAGCAGATGCTCCCTTTGATCGGATTGGTTTTCCTGAAACTCCTATGAGGGACCCAGTCATGAAGCAAGCAAGTACCTCTCCCCATTTAGGATGTCCATCCCTTGATCTGAGGGATGTGGTGAAGGAGTGTATATATAGGGAAGCCAGAGGACTGTGCAAAGAAAGGGATTCCCCTAGACAATTTCAGATGTCTAAATCTGTTGATAGAAAGCAAACTCCTACTGATTTAAAGGAGTCCTTGCGAGTCCTTTCTATCCTTAGAGAAACACCTCGGCATTATGTTGAAGCTAAAGAACTTCCTAGATTATCAAATGAAGTAAAAGATGGACATTGGCATTCCATTTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAACAACATGTGAGGTATCTTTTGATTTGCATGATACCTTGAAATGCCCACAAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAGGTTCATGGCGCGCAAACGGCTCTGATTCAAAACTCACTAACCTCTCAAGAACTTCCAATACAGGTGACGCCTCCACCTCAGTTGACAACATTTCTAGTCTACAACAGCGTTCAGCATCTCAGAGACGGCCACCTAGTATTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCAGAATCAAATGTGGCTACTGATACCAAGTCAAGTTTGAGTGAAACTGACTCCACTCAAGGTAATGATCAGTTTGGGAAAAATGGATTCGTTACACCACTTCCAGTTTCTAATTTCACTGAATTCCCATTGAAAGAGAAAGAGATGACTTCCCCACGGTGGAAGAATCCTGATTTGGTTGTCAAACCAATATTGAGTACAAGGTTTCCCATTGAACCTGCACCATGGAAGCAGCAGGATGGGAACCTAAGCTCTGACAAACTAACTTCCAGGGTCATAAAGCCTACAGCAAGAACCCTGGATTCATTTCCTTCAGTTTATAGTGAGATTGAGAATAGATTAAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACGGATATTAGAAACAATGCAAGTAAAGGGTCTGTTAGAGACCAGAAAAGAAGAACAAGCTCCAAATGTTGTTAGAAATAAAAGAGACTATGAACGAAAATCGACCTCAACTCAGCATTCTACGAGGCAGGAAACAGTCTGGGAATCTGATTCTGCAACGGCTATAGAGTCACCAATAGTGATCATGAAACCAGCAAAAATTGTTGAAAAAAGTGGACCTTTTGCTTCTTCAGTCTTTCCAATTCATGAACTTTCTGATTCCGACAAACTTCAGAGTGATGGTGTACATGTACATGGTAAAAAAGGGACACCTTCCAGTCAAATAGCCAAAGACCGGTCTCCTAGAAACAGTCCCAAGGATGCTTCTACCAGTTTTAGTGAAAAGAAAGCGAATAGTATCAAGACTATAAAATCCACACAATCCCTACCAAGCTCTACACAATTTCCAAAAGAAAATGGCCCAAGCTCAGTAAAGAGTTCAGGATCTGCTAGCCCAAGAATGCAACAGAAGAAGTCAGCATCGGAGAAGCAACCTTGCCTTCTTACCCCATCATCAGATTCAAATAATCCCAGAAGGCAGTTCTTTAAGCAGACAACACACTCAGGTTCTCCCAGTCAAAAACTGAGACCTAAAGTCCCTAATTCACAGAGCAGTGATGAAAGACTCAGTGAGACTAGCAATGAACAAAGAAGTTTAAGTAGCCAGTGGGACGAAGTATCTCTGCAATCAGACAGTATCTCTTTCGACTCAAAGATGGATATTGAAGTTACCAGCAATTTACAATCTGCTGAAGTTGCTGATGGCCAATGCCCATCTAGGAAGGCTGTTGAGCATTTGGTTTCAGGATCCATGCATAAGAAATCAACTCTGAGGTGGGATGAGGATGAGTCAATTGCAGAACTTACAACACACGTCTCTGATCATCCAAGTCTCGGATCAGATGTTGATGTCTCAGTATACAAATTCGGTATGCCATCCCCAGTAAAGAATATATCCTATTCTCGTAAAGATCAGTGGAGCCCAGCAGAAGGCCTCTTGATTAACAATATAAGATATAGAGAGATCAACCACAAGAAATTGCAAAGCATAGGTCGTCTTATTCAAAAGCTTAGACAGCTAAACTCAAGTCATGATGAAACTAGAATCGATTACATAGCTTCTCTTTGTGAAAATACAAACTCAGACCACAGATACATTGCTGAGATACTATTGGCTTCAGGTCTACTTCTGAGAGCTTTGAGTTCTGAGCTGCTGACATTTCAACATCACTCATCAGGTCATCCCATTAATCCTGAGTTATTCCTTGTGTTGGAACAAACCAAGTTAAGTAGTTTGCTTTCGAAAGAAGGGGGCAGCCATGGAAAAATTGCTTACAGGAAGCTAAATACAGAGAAGTGGCACAGGAAACTAATCTTTGATACTGTGAATGAGATTCTTCGTACAAAGCTTGGCTCTTCTCGTGAGCCATGGTTCAAGCCTGATGGACTTACAAGGAAATTCGTCACTGCACAAAAGCTTCTTAAAGAACTATGCTTTGAGATACAAAAACTTAAATATGTGAAACCAGATAGCAAAGATGAAGGGGATGATCTGAAAAGTATGCTAGGGGAAGATGTGATGCGTCACTCGGAAAATTGGACAGGTTTCCTTGGTGAATTACCCGGGGTTGTGTTGGATGTTGAGAGACAGATATTTAAGGACTTAATTGATGAATTTGTGATTGATGAAAGCTTGGGAATAACGTACAGTAGGCACAGCAAGCTATTTGGAAAGTAG 3132 0.4128 MAAKFLHSLADDNPDLKKQIGCMTGIFQLFDRHHIISSPHITQKRLHPGYSLFNYDSLERGSNIIHQTQPTADMRGMSDKQKISAESSRTSFSSSCSSSMSSLDYKAEADAPFDRIGFPETPMRDPVMKQASTSPHLGCPSLDLRDVVKECIYREARGLCKERDSPRQFQMSKSVDRKQTPTDLKESLRVLSILRETPRHYVEAKELPRLSNEVKDGHWHSISKDAPRFSYDGRTTCEVSFDLHDTLKCPQKLKELPRLSLDSREGSWRANGSDSKLTNLSRTSNTGDASTSVDNISSLQQRSASQRRPPSIVAKLMGLEALPESNVATDTKSSLSETDSTQGNDQFGKNGFVTPLPVSNFTEFPLKEKEMTSPRWKNPDLVVKPILSTRFPIEPAPWKQQDGNLSSDKLTSRVIKPTARTLDSFPSVYSEIENRLKDLEFKQSGRDLRALKRILETMQVKGLLETRKEEQAPNVVRNKRDYERKSTSTQHSTRQETVWESDSATAIESPIVIMKPAKIVEKSGPFASSVFPIHELSDSDKLQSDGVHVHGKKGTPSSQIAKDRSPRNSPKDASTSFSEKKANSIKTIKSTQSLPSSTQFPKENGPSSVKSSGSASPRMQQKKSASEKQPCLLTPSSDSNNPRRQFFKQTTHSGSPSQKLRPKVPNSQSSDERLSETSNEQRSLSSQWDEVSLQSDSISFDSKMDIEVTSNLQSAEVADGQCPSRKAVEHLVSGSMHKKSTLRWDEDESIAELTTHVSDHPSLGSDVDVSVYKFGMPSPVKNISYSRKDQWSPAEGLLINNIRYREINHKKLQSIGRLIQKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLLSKEGGSHGKIAYRKLNTEKWHRKLIFDTVNEILRTKLGSSREPWFKPDGLTRKFVTAQKLLKELCFEIQKLKYVKPDSKDEGDDLKSMLGEDVMRHSENWTGFLGELPGVVLDVERQIFKDLIDEFVIDESLGITYSRHSKLFGK* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1952 1043 MobiDBLite consensus disorder prediction 69 93 - -
Vra7g1952 1043 MobiDBLite consensus disorder prediction 264 309 - -
Vra7g1952 1043 MobiDBLite consensus disorder prediction 470 501 - -
Vra7g1952 1043 PANTHER LONGIFOLIA PROTEIN 1 1030 - -
Vra7g1952 1043 Pfam Domain of unknown function (DUF4378) 847 1023 IPR025486 -
Vra7g1952 1043 MobiDBLite consensus disorder prediction 558 691 - -
Vra7g1952 1043 MobiDBLite consensus disorder prediction 326 352 - -
Vra7g1952 1043 MobiDBLite consensus disorder prediction 543 691 - -
Vra7g1952 1043 MobiDBLite consensus disorder prediction 324 352 - -
Vra7g1952 1043 PANTHER LONGIFOLIA PROTEIN 1 1030 IPR033334 GO:0051513
Vra7g1952 1043 MobiDBLite consensus disorder prediction 266 308 - -
Vra7g1952 1043 MobiDBLite consensus disorder prediction 470 490 - -
Vra7g1952 1043 Pfam DUF761-associated sequence motif 300 327 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1952 Vra-Chr7 38988715 38993914 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1952 128 1042 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 42.813 2.30e-179 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1952 - - gmx:100775311 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1952 7 38988715 38993914 Vra7g1952 7 38988715 38993914 ECH
Vra7g1952 7 38988715 38993914 Vra2g1596 2 23943837 23949686 PCT