Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1951 ATGATGAATGAAAGTTCAAGTAAAGTTCAGCAGGGCAATCAACAAGAGGGCGAGAACATTAAAATTGAAAAGTTGTCAAAGGCGGCCTCCACCTCAAGATCATGGTCAGCATTCAGAAACCCAAGAATTGTACGAGTGTCTCGTTCTTTGGGAGGAAAAGATAGGCACAGCAAGGTTTGCACCATTAGGGGACTGAGGGACCGAAGGATTAGACTGTCTGTGCCCACAGCAATTCAGTTATATGATCTTCAAGATAAGCTTGGACTCAACCAACCTAGCAAGGTGGTAGATTGGTTGCTTGAAGTAACCAAATCTGATATTGATAAACTCCCACCACTTCAATTTCCTCACTGTTTTGCTCAGTTTCACCAACAAACTCCACTGTCAGGTACCTCTCAGTTCTCTCTTGGAAGCTTGTATGATGGTGTTAATTCCTCTTTTTTAAAGGATGGGGGAAACCAAAATCTCATGACAAAGTCAACAAGGTATTGGGATTTAGATTCTCAAAACCGTACGGAGTTAGCTGAAAGTGTCTCAACCTCCCAGAAGGGCAAGTTCTGGATCAAACCAAATGAACTAGAAAATCATCAAAATGGAATTGTTGGTACTAGTACTCGTAATAGAGAAGAATCTTCAGCTCATTGTAAGGTCTTCCCCCTTGGGACTAATAGCTCTTATTTACCTGGTTTGTCAAACAATGCCATCACACATAACTCCTACCACCATTCTGAGCCTTCAACTCTATCTTTATCCCACCTTGGAAGCCATGAATTATTTCCTTCCCATCCAAGCACTGGCAGTAGTGTGCAATTTTCATCTTCTAATTTCTGTGGAGCATCTGGTCCCCAATTACTTTTTTCTCCACCTTCTGCTACACCATCTGCTTTTTACTCGGTGGAAAGCGATCCAAGACAATCCAACAGTATTCAGATCTTTAGCTCTAGTTCCCAAGTCATGATGCCTCATCCTCTCATCCAATCTATTCATTCCACCACTTCACCTCTTAGACGCCTTCCAACATCATTAAGTTCCAAGCTTTTTGATTCAGATAATACCGATCGTAGCCAACAAGGTAAGGGTAGTACTCGTTCTTGA 1095 0.4201 MMNESSSKVQQGNQQEGENIKIEKLSKAASTSRSWSAFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLNQPSKVVDWLLEVTKSDIDKLPPLQFPHCFAQFHQQTPLSGTSQFSLGSLYDGVNSSFLKDGGNQNLMTKSTRYWDLDSQNRTELAESVSTSQKGKFWIKPNELENHQNGIVGTSTRNREESSAHCKVFPLGTNSSYLPGLSNNAITHNSYHHSEPSTLSLSHLGSHELFPSHPSTGSSVQFSSSNFCGASGPQLLFSPPSATPSAFYSVESDPRQSNSIQIFSSSSQVMMPHPLIQSIHSTTSPLRRLPTSLSSKLFDSDNTDRSQQGKGSTRS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1951 364 MobiDBLite consensus disorder prediction 1 25 - -
Vra7g1951 364 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 358 IPR005333 GO:0003700
Vra7g1951 364 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 2 358 - -
Vra7g1951 364 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Vra7g1951 364 MobiDBLite consensus disorder prediction 330 364 - -
Vra7g1951 364 Pfam TCP family transcription factor 52 180 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1951 Vra-Chr7 38982355 38985583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1951 36 195 TCP Transcription Factor Family AT5G60970 55.172 3.84e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vra7g1951 TCP 2.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1951 - - pvu:PHAVU_003G183700g 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1951 7 38982355 38985583 Vra2g1595 2 23913988 23916608 PCT