Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1934 ATGTTACCTTGGCTTTTAGCTTTTGCTAATGGCAGTGTAGCAGCTATCCTTATTTACCGTTTTTTCAAGCTCAAAACCGCGCATTCATTACCACTGCCACCAGGGCCAAGCCCATGGCCCATAGTGGGAAACTTGCCTCACATGGGCCGTGCGCCACACCAAACTGTTGCGGCCCTGGCCCATAAGTATGGCCCGCTCATGCACCTTCGGTTGGGGTTTGTCGACTTTGTGGTGGCGGCTTCCGCCTCTGTGGCGGAGCAGTTCTTGAAGGTTCACGATGCGAAGTTTGCAAACCGGCCACGGAGCTTCGTGAACAAGTACATGAGTTATTACAAGGAAGACTTTGGGTTTGCTTCCCATGGCCCTCGGTGGCGGTTGTTGAGGAAAATAAGCTCCACTCACATGTTCTCTGGTAGGGCCATGGACGATTTTAGAGAAGTGCGTGAGGAAGAGGTACAAAGACTGACATGTGATTTGGCAAGTTCAGGCTCAAAAGCTGTGAAATTGGGACTGTTGTTGAACGTGTATGCCACCAACACATTGGCAAGGGTGATGATAGGACGAAGAGTTTTCAACGATGGAAACAGTGAGTGGGATCCAAAGGCAGATGAGTTTAAATCCATGGTGTTGGAGCTCATGAACTTGTTAGGAGTTTTCAATATTGGCGACTTCATTCCATTCTTGGATTGGCTAGACCTTCAAGGAGTAAAAGCCAAAGCAAAAAAACTACGCAAGGGCTTTGACGCATTTTTAACCAGCATTCTCGAGGAACATCAGGTTTCCAAGAATGAGAAACAACAAAACACATACTTAACCACGTTGTTGTCACTCAAAGAAACTCCTCAAGATGGATACAAGCTTTGTGAAGAGGAGATCAAAGCAATACTTTTGAACATGTTTGGAGCTGGAACAGACACCTCATCAAGCACAATTGAATGGGCAATGGCTGAACTAATCAGGAACCCAAGAATTATGGTTGAGGTGCAACAAGAAATAGACAGTGTTGTGGGTGAAGACAGACTTGTGACAGAACTTGACATGCCCCGACTCCCTTACTTACAGGCTGTGGTGAAGGAAACATTGCGATTACACCCACCGACCCCTCTTTCTATTCCAAGATATGCTGAAAAAAGCTGTGAGATATTTGGTTACCACATTCCCAAAGGTGCAACTCTCATGGTGAATGTTTGGGCCATAGGACGTGACCCTAAGGAGTGGTCAGACCCATTGGAGTTCAAGCCCGAAAGGTTTCTCCTTGGTGGTGAGAAGGCTGGTGTTGATGTTAGGGGCAACAACTTTGAGGTTATACCCTTCGGCGCTGGTCGTAGAATATGTGCTGGTATGAGCTTAGGTCTGATGGAGGTTCAGCTGGTGACTGCTACCCTAGCCCATGCATTTGATTGGGAGTTAGAGAATGGAGTTGACACAAAAAGTCTCAATATGGATGAAACATATGGGCTCACCCTCCAAAGAGAAGTGCCTCTCTGTGTCCACCCTCGTCCTAGGCTCTCACGCCACTTGTATTCATCATCATCTCCATCATTTTGA 1548 0.4696 MLPWLLAFANGSVAAILIYRFFKLKTAHSLPLPPGPSPWPIVGNLPHMGRAPHQTVAALAHKYGPLMHLRLGFVDFVVAASASVAEQFLKVHDAKFANRPRSFVNKYMSYYKEDFGFASHGPRWRLLRKISSTHMFSGRAMDDFREVREEEVQRLTCDLASSGSKAVKLGLLLNVYATNTLARVMIGRRVFNDGNSEWDPKADEFKSMVLELMNLLGVFNIGDFIPFLDWLDLQGVKAKAKKLRKGFDAFLTSILEEHQVSKNEKQQNTYLTTLLSLKETPQDGYKLCEEEIKAILLNMFGAGTDTSSSTIEWAMAELIRNPRIMVEVQQEIDSVVGEDRLVTELDMPRLPYLQAVVKETLRLHPPTPLSIPRYAEKSCEIFGYHIPKGATLMVNVWAIGRDPKEWSDPLEFKPERFLLGGEKAGVDVRGNNFEVIPFGAGRRICAGMSLGLMEVQLVTATLAHAFDWELENGVDTKSLNMDETYGLTLQREVPLCVHPRPRLSRHLYSSSSPSF* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1934 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 500 - -
Vra7g1934 515 PANTHER FLAVONOID 3'-MONOOXYGENASE 13 500 - -
Vra7g1934 515 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 Gene3D Cytochrome P450 25 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra7g1934 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vra7g1934 515 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1934 Vra-Chr7 38860653 38862518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1934 17 512 Cytochrome P450 AT5G07990 61.800 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1934 K05280 - gmx:100807293 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1934 7 38860653 38862518 Vra7g1934 7 38860653 38862518 ECH
Vra7g0488 7 8110148 8113196 Vra7g1934 7 38860653 38862518 PCT