Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1919 ATGTCAGAGCAGGAACCTCATTCTTGTGGCCTACTCTTGTTCTTTTTCTTGATCCTTCTTTCAGGTAAAGTTGTTATAGGGGAATCCTTGGAAACAGACAGAGAGGTTTTGCTGAAGCTGAAATCCTACCTGGACAGCAAAACTCTTCAAGACAAAGGAGCGTACATACACTGGAACACAAGTAGCTCCAATCCTTGTCAATGGAGTGGAATTTCATGCAGTGCTACTGGGAGGGTGGTTCGCATAGGCCTTTCTCAGAGTGACATCACCGGTGAGATATTCAGGAATTTCTCGCAGCTCACTGAACTCAGGTACCTTGATCTCTCTCAGAACACGCTCTCTGGTGAGATTCCTGAGGATTTGAGGCGCTGCTACAAGCTCGTGCATCTCAACCTATCACATAATATTCTTGAAGGGGAGCTGAACTTGACTGGACTGACAAGCTTGCACACACTGGACTTGTCAAATAACAGATTTTTTGGGGATATCGGGTTGAATTTCCCTGCCATTTGTGACAATTTAGTCACTCTGAACGTCTCTGGTAATAATAACTTGACTGGCAGGATCGAAAACTGCTTTGATCAATGTCTCAAGCTGCAGTACTTGGATTTGAGCACCAACAGTCTGAGTGGAAGCTTGTGGATGAATTTTGCGAGGCTCAAAATGTTTTCTGTGGCGGAGAACCATCTGAGTGGGACTATTCCTTTGGAAGCTTTGCCTTTGAATTGCAGCCTTGAAGACCTAGACCTTTCACAAAATGGTTTTGTTGGTGAGGCACCTAAGGGGGTTGCTAACTGCAAGAATTTAAGCAGTCTGAATCTTTCTAGTAACAAATTTACCGGGGGTATCCCTGTGGAAATAGGATCCATTTCCCGGCTCAAAGCATTGTACTTGGGGAACAATACCTTTTCAAGAGAGATTCCTGAGTCCCTTCTGAACTTAACCAATTTGACCTTCTTGGATTTGAGCAGAAACCAATTTGGTGGGGAAATACAAGAGATATTCGGGAAATTTAGGCAAGTAAGTTTTCTTCTGTTGCACTCAAATAACTACACTGGAGGATTGAGATCCTCAGGAATTCTCACATTGCCAAACCTTTGGCGGTTAGACGTAAGCTACAATAACTTTTCAGGTCCGTTACCAGTTGAGATCTCTCAAATGTCAAGTCTGAAGTTTCTAATGTTATGCTACAACCAGTTCAATGGATCAATTCCACCGGAATTTGGAAACATGACTCAACTGCAAGCGCTTGACCTTGCCTTCAACAATTTGAGTGGGTCTATACCACCAACCCTCGGAAAGTTAAACTCCCTCTTATGGTTGATGTTAGCAAACAATTCTTTAACTGGAGAAATCCCTCCAGAGTTGGGAAACTGTTCAAGCTTATTATGGCTAAACCTTGCCAACAATAAGCTCTCTGGAAAGTTGCCTTCTGAACTGTCCAAAATTGGAAGGAATGCCACGACCACATTTGAATACAATAGGCGAAACTATAGAATGGTTGCTGGATCTGGTGAATGTTTGGCAATGAAGAGATGGATACCTGCAGATTACCCTCCATTCAGTTTTGTGTATGACCTCTTAACAAGGAAAAAATGTAGAGAACTTTGGGACAAATTGATCAAAGGGTATGGTGTTTTCCCGTTTTGTACACCTGGTAATTCCTCTCGCGTAACACAGATATCCGGGTATATTCAGCTAAGTTCGAACCAGCTCACTGGTGAAATTCCTCCAGAGATTGGGTCAATGGTCAACTTCAGCATGATGCACTTGGGGTTCAACAATCTCTCTGGGGAGTTACCTCGAGAGATGGGAAGTGTATCCATAGTGGTATTAAATATCACAAGAAACGAGTTTTCAGGCGAAATTCCCCAAGAAATTGGCAACATGAAATGTCTGATGAATCTGGATCTGTCGTACAACAACTTCTCGGGAATGTTTCCAACGAATTTGAACAAATTGACAGAGCTTAGCAAGTTCAACATCTCATACAATCCCTTCATATCAGGTGAGGTCCCATCCAACGGACAGTTTGCAACCTTTTTAGAAGATTCATATTTAGGTAACCCCCATTTGAAACTTCCCCAGTTTCTTCAGAACACTAGCAATGACAGAAACACCACCTCTCAGAAAGACCATAAAAAGTCCTCAAGACTACCTTTGCTTTTGGTGTTTGCGGTCATAACACTGGTTTTCATAGTATGCGGACTTCTCACTATCTTAGTCTGCGTATCGGTGAAAGGCCCTTCAGAGGAACCAAGATACCTCTTGAGGGACACAAAACAGTGGCATGATTCCAGCAGCTCCGGATCCTCATCATGGATGTCCGACACAGTGAAGGTCATCCGTTTGAACAAGACAGCTTTCACACATGCCGACATTCTGAAAGCAACTGGCAGCTTCTCCGAGGACAGAATCATAGGAAAAGGAGGGTTTGGAACAGTGTACAAGGGAGTGTTTTCAGACGGCAGACAAGTGGCAGTGAAGAAGCTTCAAAGGGAAGGCCTGGAGGGTGAGAAGGAATTCAAAGCTGAAATGGAGGTTCTGAGTGGTCATGGCTTTGGTTGGCCTCATCCAAACCTGGTCACACTCTACGGCTGGTGCCTAAACGAGTCAGAAAAGATACTAATTTATGAGTACATAGAAGGTGGAAGCTTGGAGGATGTAGTGATTGACAGAACACGTTTGACATGGAGGAGGAGGCTAGAAGTGGCAATCGATGTGGCACGTGCACTGGTGTATCTACACCACGAATGCTACCCTTCAGTTGTGCACAGAGATGTGAAGGCCAGCAATGTGTTACTAGATAAAGATGGGAAGGCGAAGGTAACTGATTTTGGGCTTGCTAGAGTGGTTGATGTTGGGGATAGCCATGTGAGCACTATGGTGGCTGGGACAGTGGGGTACGTTGCGCCTGAATATGGACACACATGGCAGGCTACTACAAAAGGGGATGTGTACAGTTTTGGAGTTTTGATCATGGAGCTGGCAGCAGCAAGAAGAGCAGTGGATGGAGGGGAAGAGTGCTTGGTGGAATGGGCTAGGCGTGTTATGGGTTATGGACGACACCATCATCGTCATCATCACGGCTTGAGTCGCTCTGTGCCAGTTCTGCTGATGGGTTCTGGGCTTGTTGGTGGGGCTGAGGAGATGACTGAGTTGCTGAGGATTGGAGTGATGTGTACAGCTGATGCACCACAGGCCAGACCGAACATGAAAGAGGTTCTTGCTATGCTGATTAAGATATTTAACCTCAGGGACCACTCCACTTATGGATACATTGTTTAG 3288 0.448 MSEQEPHSCGLLLFFFLILLSGKVVIGESLETDREVLLKLKSYLDSKTLQDKGAYIHWNTSSSNPCQWSGISCSATGRVVRIGLSQSDITGEIFRNFSQLTELRYLDLSQNTLSGEIPEDLRRCYKLVHLNLSHNILEGELNLTGLTSLHTLDLSNNRFFGDIGLNFPAICDNLVTLNVSGNNNLTGRIENCFDQCLKLQYLDLSTNSLSGSLWMNFARLKMFSVAENHLSGTIPLEALPLNCSLEDLDLSQNGFVGEAPKGVANCKNLSSLNLSSNKFTGGIPVEIGSISRLKALYLGNNTFSREIPESLLNLTNLTFLDLSRNQFGGEIQEIFGKFRQVSFLLLHSNNYTGGLRSSGILTLPNLWRLDVSYNNFSGPLPVEISQMSSLKFLMLCYNQFNGSIPPEFGNMTQLQALDLAFNNLSGSIPPTLGKLNSLLWLMLANNSLTGEIPPELGNCSSLLWLNLANNKLSGKLPSELSKIGRNATTTFEYNRRNYRMVAGSGECLAMKRWIPADYPPFSFVYDLLTRKKCRELWDKLIKGYGVFPFCTPGNSSRVTQISGYIQLSSNQLTGEIPPEIGSMVNFSMMHLGFNNLSGELPREMGSVSIVVLNITRNEFSGEIPQEIGNMKCLMNLDLSYNNFSGMFPTNLNKLTELSKFNISYNPFISGEVPSNGQFATFLEDSYLGNPHLKLPQFLQNTSNDRNTTSQKDHKKSSRLPLLLVFAVITLVFIVCGLLTILVCVSVKGPSEEPRYLLRDTKQWHDSSSSGSSSWMSDTVKVIRLNKTAFTHADILKATGSFSEDRIIGKGGFGTVYKGVFSDGRQVAVKKLQREGLEGEKEFKAEMEVLSGHGFGWPHPNLVTLYGWCLNESEKILIYEYIEGGSLEDVVIDRTRLTWRRRLEVAIDVARALVYLHHECYPSVVHRDVKASNVLLDKDGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWQATTKGDVYSFGVLIMELAAARRAVDGGEECLVEWARRVMGYGRHHHRHHHGLSRSVPVLLMGSGLVGGAEEMTELLRIGVMCTADAPQARPNMKEVLAMLIKIFNLRDHSTYGYIV* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1919 1095 SMART LRR_typ_2 435 459 IPR003591 -
Vra7g1919 1095 SMART LRR_typ_2 314 337 IPR003591 -
Vra7g1919 1095 SMART LRR_typ_2 100 124 IPR003591 -
Vra7g1919 1095 SMART LRR_typ_2 363 387 IPR003591 -
Vra7g1919 1095 SMART LRR_typ_2 146 177 IPR003591 -
Vra7g1919 1095 SMART LRR_typ_2 411 434 IPR003591 -
Vra7g1919 1095 Pfam Protein kinase domain 802 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1919 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 923 935 IPR008271 GO:0004672|GO:0006468
Vra7g1919 1095 Gene3D Phosphorylase Kinase; domain 1 764 880 - -
Vra7g1919 1095 SUPERFAMILY L domain-like 220 479 - -
Vra7g1919 1095 Gene3D Ribonuclease Inhibitor 191 358 IPR032675 -
Vra7g1919 1095 Gene3D Ribonuclease Inhibitor 606 692 IPR032675 -
Vra7g1919 1095 Gene3D Ribonuclease Inhibitor 359 500 IPR032675 -
Vra7g1919 1095 Gene3D Transferase(Phosphotransferase) domain 1 881 1091 - -
Vra7g1919 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1086 - -
Vra7g1919 1095 Pfam Leucine Rich repeat 147 165 IPR001611 GO:0005515
Vra7g1919 1095 Gene3D Ribonuclease Inhibitor 552 605 IPR032675 -
Vra7g1919 1095 ProSitePatterns Protein kinases ATP-binding region signature. 807 830 IPR017441 GO:0005524
Vra7g1919 1095 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Vra7g1919 1095 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1086 - -
Vra7g1919 1095 Pfam Leucine rich repeat 96 135 IPR001611 GO:0005515
Vra7g1919 1095 Pfam Leucine rich repeat 268 327 IPR001611 GO:0005515
Vra7g1919 1095 CDD STKc_IRAK 807 1082 - -
Vra7g1919 1095 SUPERFAMILY RNI-like 76 285 - -
Vra7g1919 1095 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Vra7g1919 1095 SUPERFAMILY L domain-like 564 691 - -
Vra7g1919 1095 ProSiteProfiles Protein kinase domain profile. 801 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1919 1095 SUPERFAMILY Protein kinase-like (PK-like) 783 1080 IPR011009 -
Vra7g1919 1095 SMART serkin_6 801 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1919 1095 PRINTS Leucine-rich repeat signature 103 116 - -
Vra7g1919 1095 PRINTS Leucine-rich repeat signature 146 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1919 Vra-Chr7 38701376 38705334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1919 39 1082 Receptor kinase-like Gene Family AT4G39400 33.276 4.17e-150 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Vra7g1919 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1919 - - gmx:100816573 1843.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1919 7 38701376 38705334 Vra7g1919 7 38701376 38705334 ECH