Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1912 ATGGACGTAGAGAACAAAGGAACCAGACTCAAACCTACGTTTCTATTATTCCTTGTCATTCTTCACCTTTTCCTTTCCACCCTAGCCAAATCTTCTTTCACACCTCATGTTAACTATCTCCTTGATTGTGGCTCCTCCCACCCCACTCAGCTCACAGATGGAAGAACCTTCAAATCTGATCGCCAAACCACTTCTCTCCTAGCCACAGCTGAAGATGTGCAAATATCACTTCACTCAAATCTCTCCCCTTCTGTTCCTTCTTCATTGCTTCCTTTGTATCAAACTGCCAGGGTTTTTCAAGAGGAATCCACCTACTCCTTTTACATATCCAAAACTAGTAGACTTTGGGTTCGTCTTTACTTCTTCCCTCTCTCTAACCCTTCGTATAACCTAACAACTGCCGTTTTCTCTGTCCAAACTAATCACCATGTGCTCCTGCATGAGTTCTCCGCTAGGAACAATGACTCACCTGTTTTCAAGGAATACCTTGTTAACGTTTCTGATAGTAGATTTTCCCTCAAATTCAAGCCCAAGAAAAGCTCCTTTGCGTTCATCAATGCAATTGAGGTTGTCTCAGCCCCTGACGCTCTTATTTCGGATTCAGCAACTGCACTTTCCCCACTTGCTGAATTCAAAGGCTTGTTCAATTCTGCTCTTGAAGTATCCTACAGAATAAACGTTGGTGGTCCCACCATAACTCCTGACGACGACACTTTGGCAAGAACATGGGAAACTGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGACTATTTCTGTCTCCAAAAAAGGCATAAAGTATCCTGATGTCGGGGTTACACCTTCGATTGCTCCCAACTTGGTTTATGCAAGTGCTGTACACGTGAAGAACGCTACATTCATGCGACCGAATTTCAATCTCAGTTGGATGGTGAACGTGGAAAGGAGCTACTCTTATTTGATAAGAATGCATTTCTGTGACATTTTGAGCAGGAGTCTTAATCAGTTATACTTTAATGTGTACATCAATGGAATTGAGGGTGTATCAGCTTTGAATCTATCATCGCAAACCAAAGCTCTAGCCACCGCTTTTTACCAGGACTTTGTGTTAAATGCACGGGATATCATAAACGGTTCCATTTTGGTTCAGGTGGGACCGACCAATCTCCCACAAGGCACGACCGATGCAATTCTGAATGGATTTGAGGTGATGAAGATTAGCAACATCGCAGACAGCTTGGATGGTTTATACTCTGTTGATGGGAAATACAAAGGGCCATGTTCAACACCCATGGAAATGAAAATTTTGGCTTATGTTGGACTTGCATTGGCTGTGACAACAATTCTGTTGCTAGTAATAACTTGCACAAGGTGGAGAAAGAGGCCTCAAGGTTGGGAAAATCATAGCAGGTTCTCATCATGCCCCCTTCCTGTCCATTCCCCTATATCGTGTTCAAGCAAAAGCAGTTGTCGAGGGTCAACAGCATCCAGTTCCCGCAAAAGCAATAAACATGGTAATCGTGTCACCCCACAAGGGCCCAAAAGGTTCTTCCCTTTCAGTGAAATGCGACAAGCCACCAATAATTTCGAAGAGAAAAGAGTAATTGGTGTTGGAGGCTTCGGCAAAGTGTATCTTGGAACGTTGAAAGATGGGACAAAGGTTGCCATAAAACGAGGAAGTGGTAATTCAGAACAAGGCATCAATGAATTCAGAACAGAATTGGAAATGCTGTCAAAGCTACGCCATCGCCACCTTGTCTCATTGATAGGTTTCTGTGATGAAAACTCAGAGATGGTTCTTGTGTATGAGTACATGGCTAATGGCCCTTTTCGTTCTCACATCTATGGGTTCGACCTGCCTTGTTTGTCATGGCAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGTGGGTTGTACTATCTCCACACTGGAGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATACTCTTAGATGAGAATTACGTGGCCAAGGTTTCTGACTTTGGTTTGTCAAAGGTTGTCCCAGATGAAGCTCAAGTTAGCACAGCCGTGAAGGGTAGTTTTGGGTACCTTGACCCTGAGTACTATAGGAGTCAACAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTATTTGAGGTATTATGTGCTAGGCCAGTTATTTGCCCAACACGTCCAACAGAAGAGATTAACTTGGCTGAATGGGCAAAGAAACAGCATAGAAGAGGATTGGTGAATGAAATAATTGATCAACGTATTGCTGTTACTATGAATCCTCAATCACTCAGTGTTTTTGTGGAAATTGCTGAGAAATGTTTAGCAGACTGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAATACGCGTTGCGCCTACAAGAAGCTGCCTCACGGATTGATGAAGCTGAAGATAAAAGGGCAAGTATAGCCACAAATGAGGATCTGTATTTTCTGTGA 2472 0.4333 MDVENKGTRLKPTFLLFLVILHLFLSTLAKSSFTPHVNYLLDCGSSHPTQLTDGRTFKSDRQTTSLLATAEDVQISLHSNLSPSVPSSLLPLYQTARVFQEESTYSFYISKTSRLWVRLYFFPLSNPSYNLTTAVFSVQTNHHVLLHEFSARNNDSPVFKEYLVNVSDSRFSLKFKPKKSSFAFINAIEVVSAPDALISDSATALSPLAEFKGLFNSALEVSYRINVGGPTITPDDDTLARTWETDGSYNIFPQGSETISVSKKGIKYPDVGVTPSIAPNLVYASAVHVKNATFMRPNFNLSWMVNVERSYSYLIRMHFCDILSRSLNQLYFNVYINGIEGVSALNLSSQTKALATAFYQDFVLNARDIINGSILVQVGPTNLPQGTTDAILNGFEVMKISNIADSLDGLYSVDGKYKGPCSTPMEMKILAYVGLALAVTTILLLVITCTRWRKRPQGWENHSRFSSCPLPVHSPISCSSKSSCRGSTASSSRKSNKHGNRVTPQGPKRFFPFSEMRQATNNFEEKRVIGVGGFGKVYLGTLKDGTKVAIKRGSGNSEQGINEFRTELEMLSKLRHRHLVSLIGFCDENSEMVLVYEYMANGPFRSHIYGFDLPCLSWQKRLEICIGAARGLYYLHTGAAQSITHRDVKTTNILLDENYVAKVSDFGLSKVVPDEAQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVLFEVLCARPVICPTRPTEEINLAEWAKKQHRRGLVNEIIDQRIAVTMNPQSLSVFVEIAEKCLADCGVDRPSMGDVLWHLEYALRLQEAASRIDEAEDKRASIATNEDLYFL* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1912 823 Gene3D Transferase(Phosphotransferase) domain 1 599 819 - -
Vra7g1912 823 Coils Coil 790 817 - -
Vra7g1912 823 Gene3D Phosphorylase Kinase; domain 1 483 598 - -
Vra7g1912 823 PANTHER OS07G0166700 PROTEIN 23 810 IPR045272 GO:0004714|GO:0006468
Vra7g1912 823 CDD STKc_IRAK 529 792 - -
Vra7g1912 823 Gene3D - 34 194 - -
Vra7g1912 823 Gene3D - 218 401 - -
Vra7g1912 823 SUPERFAMILY Protein kinase-like (PK-like) 499 793 IPR011009 -
Vra7g1912 823 SMART serkin_6 523 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1912 823 MobiDBLite consensus disorder prediction 476 507 - -
Vra7g1912 823 MobiDBLite consensus disorder prediction 476 502 - -
Vra7g1912 823 Pfam Malectin-like domain 41 400 IPR024788 -
Vra7g1912 823 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 810 - -
Vra7g1912 823 ProSiteProfiles Protein kinase domain profile. 523 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1912 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Vra7g1912 823 Pfam Protein tyrosine and serine/threonine kinase 525 788 IPR001245 GO:0004672|GO:0006468
Vra7g1912 823 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1912 Vra-Chr7 38600406 38602941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1912 29 810 Receptor kinase-like Gene Family AT5G61350 58.846 0.0 946
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vra7g1912 Malectin_like 1.2e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1912 - - gmx:100814982 1241.48