Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1905 ATGGAAACTGAAATAATCCAGGGACCTTGGGGACTTCGCTCTCTACCTAAATTCATATTGTGCACCATTTCTGGGGCCCTCACCGTGTGTTTTGCCATTGCTGGTGCCATGACAGGAGCTATAGCTGGTGCTTTAGCGGCTAAGGCTACAAGGAGCGGTCTTCTCCGGGGAGTTTCTTTGGGTGCCATTGCCGGCTCTATACTCTCAGTGGAGGTGTTGGAAGCTTCCCGTGCATACTGGTGTATGGAACAAACTGGCTCACGGGGAGCATCATCTATGGCAGATTTCATAGAGGAACTTGTTCGGGGGAGGCTTGTTGAGGAATCCCTTACACCAGCCATTTTAACTGCCTACAATTTGCAGGTTGGCATTGCTAATGCAGGCTATGATGAGATTCATGATGTTCATGGCTTAGTGGCACCCAGAGGATTGTCAGGAGATTCGCTCAAGAGGTTACCACACCATATGATCTCAAAGGATATGAAGGCAGAAAATACTTGTTGTACAATATGTTTGCAGGATATTGAAGTAGGCGAAATTGCAAGAAGCTTACCTCGCTGTCACCATACATTTCACTTGATATGTGTGGACAAATGGCTTGTCAAGAATGATTCCTGTCCTGTCTGTAGACAGAATGTGTAA 642 0.4657 METEIIQGPWGLRSLPKFILCTISGALTVCFAIAGAMTGAIAGALAAKATRSGLLRGVSLGAIAGSILSVEVLEASRAYWCMEQTGSRGASSMADFIEELVRGRLVEESLTPAILTAYNLQVGIANAGYDEIHDVHGLVAPRGLSGDSLKRLPHHMISKDMKAENTCCTICLQDIEVGEIARSLPRCHHTFHLICVDKWLVKNDSCPVCRQNV* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1905 213 ProSiteProfiles Zinc finger RING-type profile. 168 210 IPR001841 -
Vra7g1905 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 213 IPR013083 -
Vra7g1905 213 SUPERFAMILY RING/U-box 149 213 - -
Vra7g1905 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 12 212 IPR044523 -
Vra7g1905 213 Pfam Ring finger domain 168 210 IPR001841 -
Vra7g1905 213 SMART ring_2 168 209 IPR001841 -
Vra7g1905 213 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 12 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1905 Vra-Chr7 38546045 38549664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1905 14 213 C3H Transcription Factor Family AT1G74410 57.214 2.73e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1905 - - gmx:100800105 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1905 7 38546045 38549664 Vra7g1905 7 38546045 38549664 ECH