Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1857 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGAACTGGTTGCGCCCACTATTACTCCTGCAACTAACAACACTCTTGTTACTGACACAAAACAAACCGAAAATCGCACCATAACTTGCCCCTCATGTGGCCATAACATTGAATTCCAAGATCAGACAGGAATCAATGACTTGCCGGGGTTACCATCTGGTGTGAAATTTGATCCGAATGACCAAGAGATATTAGAGCATTTGGAAGCAAAGGTACTTTCTGATGTTCCCAAGCTCCATCCCCTCATTGATGAGTTCATACCAACGCTTGAAGGGGAGAACGGGATCTGTTACACACACCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAGATCCGGCACTTCTTTCATAGGCCGTCGAAAGCATACACAACCGGAACAAGGAAGAGAAGAAAGGTTCACACTGATGAAGAGGGAAGCGAGACAAGGTGGCACAAAACAGGAAAAACCAGACCAGTTTTTGTTGGAGGTGCTGTGAAGGGTTTCAAGAAAATACTGGTCCTGTACACCAACTACGGGAGGCAAAAGAAGCCGGAGAAGACGAACTGGGTGATGCATCAGTACCATCTTGGCAGCAACGAAGAAGAGAAAGATGGAGAATTAGTGGTTTCAAAGGTGTTCTACCAAACACAGCCTCGACAATGTGGTACTTCGATCATAAAGCAGGATCTGTACGATGAAGAAAGATTGACTAACCAGGGTGTTGTCGATGATGATAATATAGTACCCAGAAGTGCAACTCTAATGGAATACTACAACAATACTTCTTTCATAAATTATGAGCATGTGGGTGGTCGCAATAATAGGGAAACTTCACCTCAACTTATTCCAAATTTGGTTATGCAAGGTGATAGCTCTTCTTTCATTCGCTTAGCAATGGATGCCACCAAAGCCAGGCTGAACACAAAATAG 951 0.4406 MTWCNDSDEERGIELVAPTITPATNNTLVTDTKQTENRTITCPSCGHNIEFQDQTGINDLPGLPSGVKFDPNDQEILEHLEAKVLSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGTSIIKQDLYDEERLTNQGVVDDDNIVPRSATLMEYYNNTSFINYEHVGGRNNRETSPQLIPNLVMQGDSSSFIRLAMDATKARLNTK* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1857 316 Pfam No apical meristem (NAM) protein 64 203 IPR003441 GO:0003677|GO:0006355
Vra7g1857 316 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 300 - -
Vra7g1857 316 SUPERFAMILY NAC domain 58 222 IPR036093 GO:0003677|GO:0006355
Vra7g1857 316 Gene3D NAC domain 72 226 IPR036093 GO:0003677|GO:0006355
Vra7g1857 316 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 300 IPR044799 GO:0003700
Vra7g1857 316 ProSiteProfiles NAC domain profile. 63 222 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1857 Vra-Chr7 38006147 38009183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1857 1 232 NAC Transcription Factor Family AT4G28500 72.103 1.34e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vra7g1857 NAM 2.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1857 - - gmx:100795920 562.762