Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1856 ATGAACCATGGCTACGTTGTTTATGATTTAATTATGGCCACTCTATCCTTGTCCCTCATAATTCTCGGTGCTGTCCTCTTTGTTGCATGCAAGAAGAAACCAGATGCGTGTGAAGAAACTGTTGCTGTGAAGCACTGTGCTCGAGTGTACTCATTGATGGACATTGATGCTGTCACTGATAGCTTCAACCACAGGAGAGTACTGGGAAAGGGTCCTCTGGGAACCGTGTATGTTGGGGTGCAAGAGAATGGAGAGCTTGTGGCTGTGAAAAGGATCCATCCCGTGCTTGTCTTGAGCAACGCAGGATTAGGATTCTCATCAGTGTTGAAATGGCTCTCTTCAGTTCAACATCCCAACGTAGTTCCTATAATTGGATTCTCAGAAGCTCCGGGTGAAAGAGTTATAGTGATGGAGTTTGAGCGCACGATGAGCTTGGAGTTCTGTTTGCATGAAAACGTTAATGGGGCATCACTTTTGGATTGGAACAAGAGGATCAGAATTGCAGCAGGAGCAGCTAGAGGGCTTCAGTATTTGCATGAAGTGGCAACACCAAACATCGTACATGGGCGAGTTAAGTCCTCAAATGTTTTAATTGATGTCAACTTTTGTCCTAGGATTTGTGATTATGGTCTGAACTTTTTGGCAGCAGGAGAAACGAGAGAGCTAGTAGGTTATGTGGATGATGAGTATTGGAATGAAAGAGGAGGTGGTGGAAGCAAGGAAAGTGATGTTTATGGTTTGGGAGTTGTATTGCTTGAGCTATTGAGTGGTAGAGAATGCAATGAAGGAGTGATAGTAGAGTGGGGTTTGCCTTTGATAAAGGCTTTGGGTTTTGGTGAAGTTTTGGATCCTAGGATGGTAATTCCTTCTGACATGAAGAATGTAGTTAGATTAGCCAAAGTTGCTTCGGCTTGTGTTGGTAATTCCAGAAAGTGTAGACCTTCCATAGCACAAGTGGCTACTATTTTAAACAATTTAGAGATGGAAGTGTGCATTTCTGATCTTTAA 1008 0.4315 MNHGYVVYDLIMATLSLSLIILGAVLFVACKKKPDACEETVAVKHCARVYSLMDIDAVTDSFNHRRVLGKGPLGTVYVGVQENGELVAVKRIHPVLVLSNAGLGFSSVLKWLSSVQHPNVVPIIGFSEAPGERVIVMEFERTMSLEFCLHENVNGASLLDWNKRIRIAAGAARGLQYLHEVATPNIVHGRVKSSNVLIDVNFCPRICDYGLNFLAAGETRELVGYVDDEYWNERGGGGSKESDVYGLGVVLLELLSGRECNEGVIVEWGLPLIKALGFGEVLDPRMVIPSDMKNVVRLAKVASACVGNSRKCRPSIAQVATILNNLEMEVCISDL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1856 335 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 4 331 - -
Vra7g1856 335 Pfam Protein kinase domain 63 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1856 335 SUPERFAMILY Protein kinase-like (PK-like) 45 323 IPR011009 -
Vra7g1856 335 Gene3D Phosphorylase Kinase; domain 1 25 139 - -
Vra7g1856 335 ProSiteProfiles Protein kinase domain profile. 62 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1856 335 Gene3D Transferase(Phosphotransferase) domain 1 142 332 - -
Vra7g1856 335 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 331 - -
Vra7g1856 335 PIRSF ILK 31 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1856 Vra-Chr7 37994563 37995934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1856 31 323 Receptor kinase-like Gene Family AT3G59420 37.785 2.25e-51 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vra7g1856 Pkinase 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1856 - - gmx:100809726 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1856 7 37994563 37995934 Vra10g1280 10 18197373 18199274 PCT