Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1853 ATGGAGTCGCGAGTACTGTCACGCGCCGGAGCCTTCTCCTCCCTCGCTCACCTCCGCAAGCCTCCGCGGGACGTCGCTGGCGGTGCCTCCTTCGTCACGGTGAAGACCGTGGGGTCCCTCGCGGAAGGTGGGAATCTGATTTGGGGGAGGCAGCTGCGTCCGGAGCTCTGCTCGCCGGCGCTGAAGAAGGAGGCTGTCCTCCTCCGGCCTTGCCTGGCCGCCACCTCCTCGCCGGCCGAGGGTGGTGATTCCGCCGGGGAAAAGGTTGCTCCCGCGGGATTCTTCGACAAATACCCCGCTCTTGTCACAGGGTTTTTCTTCTTCACGTGGTACTTCTTGAACGTGATTTTCAACATCCTCAACAAGAAGATCTACAACTATTTCCCCTATCCGTACTTCGTATCCGTCATCCATTTATTCGTCGGTGTGGTGTACTGTTTGGGGAGCTGGACCGTGGGCCTTCCTAAGCGTGCTCCTATAGACTCCAACCTGCTGAAGTTGCTCATTCCGGTGGCTGTGTGCCATGCATTAGGCCATGTGACCAGCAATGTCTCATTTGCTGCAGTTGCTGTTTCTTTCACTCATACCATTAAAGCTCTTGAACCATTCTTCAATGCTGCTGCTTCACAGTTCATCCTTGGCCAATCCATTCCCATCACTTTGTGGCTGTCTCTGGCTCCCGTTGTTATTGGTGTGTCCATGGCATCTTTGACCGAGCTCTCATTCAACTGGGTTGGCTTCATAAGTGCTATGATTTCAAACATTTCCTTCACCTACCGGAGCATCTATTCAAAGAAAGCCATGACGGATATGGATAGTACCAATGTCTATGCCTACATTTCCATCATTGCTCTAATTGTCTGCATACCTCCTGCAGTAATTGTGGAAGGCCCTGCTCTGTTGAAGCACGGCTTCAATGATGCTATTGCTAAAGTAGGTTTGGTCAAGTTCGTCTCAGATCTCTTCTGGGTTGGTATGTTTTACCATCTCTACAACCAGGTGGCTACCAACACTCTTGAGAGAGTGGCTCCTCTCACTCATGCAGTTGGGAACGTACTGAAACGTGTATTTGTGATTGGATTTTCGATTATAGTCTTCGGTAACAAGATTAGCACCCAAACTGGTATAGGAACAGCCATTGCAATTGCTGGAGTGGCACTCTACTCTCTCATCAAAGCCAGGTTGGAGGAAGAGAAACGACAAGCGAAAGCAGCATAA 1218 0.5099 MESRVLSRAGAFSSLAHLRKPPRDVAGGASFVTVKTVGSLAEGGNLIWGRQLRPELCSPALKKEAVLLRPCLAATSSPAEGGDSAGEKVAPAGFFDKYPALVTGFFFFTWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLGSWTVGLPKRAPIDSNLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWVGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPAVIVEGPALLKHGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTAIAIAGVALYSLIKARLEEEKRQAKAA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1853 405 Coils Coil 388 405 - -
Vra7g1853 405 PANTHER SOLUTE CARRIER FAMILY 35 25 397 - -
Vra7g1853 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 238 - -
Vra7g1853 405 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 101 399 IPR004696 GO:0016021|GO:0022857|GO:0055085
Vra7g1853 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 391 - -
Vra7g1853 405 PANTHER BNAC02G47130D PROTEIN 25 397 - -
Vra7g1853 405 Pfam Triose-phosphate Transporter family 102 389 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1853 Vra-Chr7 37926929 37931656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1853 1 403 Antiporters AT5G46110 77.966 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1853 K15283 - gmx:100794336 738.028