Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1849 ATGGATTCTGACTTCTGGACCTCGCGTCTTGCCGCCGCTAAACGCCAATACACCCTTCAGCATCACCATCAAAATTCTCATTTAGATCGGTTGGGAATCGATGATTTTGATGTGGAAGAAGAGGTGCGACCTGATTTCCCTTGCCCCTATTGCTATGAAGACTTTGACATCGCGTCTTTGTGTTCTCATCTTGAAGACGAACATTCTTGCGAAGCGAGAGTCACGAGAAGACGCAGGTTAAGAAGAGTTGCTATTCCAAACAGTCAGACACTGTCTCTCTTGGGTCGAGATCTTCGTGAGGCTCATCTACAGGTGCTTCTTGGTGGTGCTGGGGGAGGATACCGGTCAAACAGTGCAGCAGTGTCTAATGTTGCTACTGATCCCTTTCTATCCTCATTTATTTTGAATTTCCCAGCGTGTGAAGCAGAAGAGATTTCAAAATCTGTGGTAACAACTGCTGAGGATTCTTCTGCAAAAAATGTGACACCTGAACACATTTGGAAATCAAGTTTTGATCCCTCTTTGAGCAGCGAAGAGCGGGAGAAAAGGATGAGACAAGCTGCTGGGAGATCTGGTTTTGTGCAGGACTTGTTTCTTTCAACTTTGTTAGGCGACTAA 618 0.4563 MDSDFWTSRLAAAKRQYTLQHHHQNSHLDRLGIDDFDVEEEVRPDFPCPYCYEDFDIASLCSHLEDEHSCEARVTRRRRLRRVAIPNSQTLSLLGRDLREAHLQVLLGGAGGGYRSNSAAVSNVATDPFLSSFILNFPACEAEEISKSVVTTAEDSSAKNVTPEHIWKSSFDPSLSSEEREKRMRQAAGRSGFVQDLFLSTLLGD* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1849 205 Pfam Stress-induced protein Di19, C-terminal 91 202 IPR027935 -
Vra7g1849 205 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 204 IPR033347 -
Vra7g1849 205 Pfam Drought induced 19 protein (Di19), zinc-binding 45 73 IPR008598 -
Vra7g1849 205 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1849 Vra-Chr7 37845476 37848452 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vra7g1849 Di19_C 4.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1849 - - gmx:100792230 362.073