Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vra7g1834 | ATGGAGGAGATTTCAAGTTCAGGGTACAAGGAATATGTTGCTGGCTGTCTCGCTGGTGTTGCCGCTGTAGCCTCTGGCCACCCCTTTGACACCGTCAAGGTGATGCTGCAAAAGCACAATGCAGAAGCACATATGATTCAGTACAGAAATGGATTACATTGCACTGCTAGGATATTAAAGACAGAAGGAATCAAAGGACTTTATAGAGGAGCAACATCATCTTTTGTTGGGATGGCAGTAGAAGGATCACTATTTTTTGGTATTTATTCCCAGACAAAAATGTACCTTCAGGGGGGAGTTCAAAGTGGGGAACCACGGCCGCAAGTAATAATACCGTCTGCAGCTTATAGTGGTGCCATCATCAGTTTTGTGTTAGGTCCAACAGAGCTGATAAAGTGTAGGATGCAGATACAAGGCACCGACTCTTTGGTTCCCAAGTCCAGTAGATACAGTAGTCCCCTTGATTGTGCTCTTAAAACAGTAGAAACTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTGTACAACATTGCTTAGAGAATCTATAGGGAATGCTGTCTTTATGAGTGTTTACGAATATGTGCGTCATCAAATGCATTCAAATATCAAAGTTTCTTCATCCAATTACAGCAACCTGGTTGATATTGGAATCGGGATTGCTGCTGGTGGTCTTGGTGGTGTTGGTTTTTGGTTGACGGTTTTGCCTCTTGACGTGGCAAAGACTTTAATTCAGACAAACCCTGACAAAAACTGTCCAAGAAATCCTTTTCGGGTCTTGAGTTCAGTCTACCAAAGGGCTGGATTGAAGGGGTGCTATGCAGGTTTAGGTCCTACTATAAGTCGAGCATTTCCTGCTAATGCTGCAACAATTGTCGCGTGGGAGTTAGCATTGAAAATGCTAAGCATAAGGCGTGACTAA | 918 | 0.4346 | MEEISSSGYKEYVAGCLAGVAAVASGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTARILKTEGIKGLYRGATSSFVGMAVEGSLFFGIYSQTKMYLQGGVQSGEPRPQVIIPSAAYSGAIISFVLGPTELIKCRMQIQGTDSLVPKSSRYSSPLDCALKTVETEGVKGIFRGGCTTLLRESIGNAVFMSVYEYVRHQMHSNIKVSSSNYSNLVDIGIGIAAGGLGGVGFWLTVLPLDVAKTLIQTNPDKNCPRNPFRVLSSVYQRAGLKGCYAGLGPTISRAFPANAATIVAWELALKMLSIRRD* | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vra7g1834 | 305 | PANTHER | - | 132 | 304 | - | - | |
| Vra7g1834 | 305 | PANTHER | - | 5 | 132 | - | - | |
| Vra7g1834 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 6 | 95 | IPR018108 | - | |
| Vra7g1834 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 105 | 197 | IPR018108 | - | |
| Vra7g1834 | 305 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 132 | 304 | - | - | |
| Vra7g1834 | 305 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 5 | 132 | - | - | |
| Vra7g1834 | 305 | Gene3D | Mitochondrial carrier domain | 10 | 304 | IPR023395 | - | |
| Vra7g1834 | 305 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 213 | 299 | IPR018108 | - | |
| Vra7g1834 | 305 | Pfam | Mitochondrial carrier protein | 219 | 300 | IPR018108 | - | |
| Vra7g1834 | 305 | Pfam | Mitochondrial carrier protein | 9 | 97 | IPR018108 | - | |
| Vra7g1834 | 305 | Pfam | Mitochondrial carrier protein | 113 | 199 | IPR018108 | - | |
| Vra7g1834 | 305 | SUPERFAMILY | Mitochondrial carrier | 9 | 294 | IPR023395 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vra7g1834 | 2 | 300 | Antiporters | AT1G79900 | 30.492 | 6.02e-32 | 119 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vra7g1834 | K15109 | - | gmx:100815087 | 536.569 |