Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1821 ATGATGGATGAAGATAGCAGCAATTCTTGGTTAAGGAGGACCAAATTCTCCCACACAGTTTGTCACCGGTTGGATTATTCCAGTTCCAGTTTAGGGTCTTTCAGCATTCAGCCAAGGACACAGCACAGTTCGAGTCTGAAATCAAGACCAGATGTAACTTTTGTTTCCGAAACCTCCTCGCAGGTTCGGAAAAAGCCAATAATGAGCAAACAGAGATCTTTGTCCCCTTTGCCTGAAACCTCTCTGTCTGAAACCTTCAAGGAAGCTAGATATGAGAGGAAGAGGTTCTCCACACCTGGTCCAAGGAGGAAAGAGCATGATAAGAAAATCATGGGGAAGTTACTGAACAAGGATTCTCGTGTGTCCAGTTCTAAATCTCCTTACAGCAGCCCAATGACTAAATCCCCTTACAACAGTCCAATGACCAAATCCCCTTACAGCAGTCCAATTAGACACCTTGCTTCAATCAAATTAAGCGACAAGTCCAAGCAGCGCAAGGATTCAGGATGGACGAAGTATTTTGACCATGGAGGAGGAAAGGTAACTGCTGTGGAAACAGCTGAGGAATGGAATGTTGATCTCTCTATGCTCTTTGTTGGTGTTAGGTTTGCTCATGGGGCTCACAGCAGGCTTTACCATGGCATGTATAAAGATGAAGCTGTGGCTGTAAAAATTATCAGGGTACCAGATGATGACGAAAATGGAATGTTAGCTGATCGATTAGAGAAACAATTCATTAGAGAAGTAACACTTTTATCTCGTCTCCACCATCGAAATGTTATCAAGTTCGTAGCAGCATGCAGAAAGCCACCTGTTTACTGTGTTATCACAGAATATCTATCAGAAGGTTCCTTGAGGTCATATTTGCATAAGTTGGAGACAAAAACTATTCCTCTAGAGAAGCTAATTACTTTTGCTCTGGATATTGCTCGTGGGATGGAATACATACACTCTCAAGGTGTCATTCACCGAGACCTCAAACCAGAGAATGTCCTTATTAATGAAGACTTTCACCTCAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAGCTTACTGTGACTTATTTGCTGATGATCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGAAAATCCTATGGAAGAAAAGTTGATGTATATAGTTTTGGGCTAATCTTATGGGAAATGGTTACTGGAACTATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTAGTAAATAAGAATTCAAGGCCAGTTATTCCTTCAGATTGTCCAGCTGCAATGCGAGCTTTAATCGAGCAATGTTGGTCTTTGAATCCGGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTATTAGAACAATTTGAATCTTCGCATGCTCGTGATGGAACACTGACTCTGGTGCAAAACCCTTGCTGCCAAGATCATAAGAAAGGGCTTCTCCATTGGATTCAAAAGCTTGGTCCTGTGCATCAAAACAATGGTCCTGTGCCTAAACCCAAATTTACCTGA 1515 0.4257 MMDEDSSNSWLRRTKFSHTVCHRLDYSSSSLGSFSIQPRTQHSSSLKSRPDVTFVSETSSQVRKKPIMSKQRSLSPLPETSLSETFKEARYERKRFSTPGPRRKEHDKKIMGKLLNKDSRVSSSKSPYSSPMTKSPYNSPMTKSPYSSPIRHLASIKLSDKSKQRKDSGWTKYFDHGGGKVTAVETAEEWNVDLSMLFVGVRFAHGAHSRLYHGMYKDEAVAVKIIRVPDDDENGMLADRLEKQFIREVTLLSRLHHRNVIKFVAACRKPPVYCVITEYLSEGSLRSYLHKLETKTIPLEKLITFALDIARGMEYIHSQGVIHRDLKPENVLINEDFHLKIADFGIACEEAYCDLFADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPVIPSDCPAAMRALIEQCWSLNPDKRPEFWQVVKVLEQFESSHARDGTLTLVQNPCCQDHKKGLLHWIQKLGPVHQNNGPVPKPKFT* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1821 504 MobiDBLite consensus disorder prediction 31 81 - -
Vra7g1821 504 SMART serkin_6 197 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1821 504 PRINTS Tyrosine kinase catalytic domain signature 277 290 IPR001245 GO:0004672|GO:0006468
Vra7g1821 504 PRINTS Tyrosine kinase catalytic domain signature 315 333 IPR001245 GO:0004672|GO:0006468
Vra7g1821 504 PRINTS Tyrosine kinase catalytic domain signature 361 371 IPR001245 GO:0004672|GO:0006468
Vra7g1821 504 PRINTS Tyrosine kinase catalytic domain signature 380 402 IPR001245 GO:0004672|GO:0006468
Vra7g1821 504 PRINTS Tyrosine kinase catalytic domain signature 424 446 IPR001245 GO:0004672|GO:0006468
Vra7g1821 504 ProSiteProfiles Protein kinase domain profile. 197 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra7g1821 504 SUPERFAMILY Protein kinase-like (PK-like) 186 453 IPR011009 -
Vra7g1821 504 Gene3D Phosphorylase Kinase; domain 1 185 281 - -
Vra7g1821 504 MobiDBLite consensus disorder prediction 116 148 - -
Vra7g1821 504 MobiDBLite consensus disorder prediction 117 148 - -
Vra7g1821 504 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 480 - -
Vra7g1821 504 Gene3D Transferase(Phosphotransferase) domain 1 282 481 - -
Vra7g1821 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 321 333 IPR008271 GO:0004672|GO:0006468
Vra7g1821 504 PANTHER TYROSINE KINASE FAMILY PROTEIN 5 480 - -
Vra7g1821 504 CDD STKc_MAP3K-like 204 453 - -
Vra7g1821 504 Pfam Protein tyrosine and serine/threonine kinase 204 453 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1821 Vra-Chr7 37457228 37461725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1821 2 504 MAP Kinase Kinase Kinase AT5G58950 57.169 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vra7g1821 PK_Tyr_Ser-Thr 7.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1821 - - gmx:100784454 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1821 7 37457228 37461725 Vra10g1308 10 18464302 18467052 PCT